Welcome to Galaxy Training!

Collection of tutorials developed and maintained by the worldwide Galaxy community

Galaxy for Scientists

We have separated the tutorials into several categories based on field and technology. We are exploring other ways to organise the tutorials going forward!

Start Here

Topic Tutorials
Introduction to Galaxy Analyses 14
Using Galaxy and Managing your Data 27

Not sure where to start?

Try the NGS Basics Learning Path! Start Learning

Scientific Fields

Topic Tutorials
Climate 14
Computational chemistry 9
SARS-CoV-2 9
Foundations of Data Science 50
Digital Humanities 3
Ecology 28
Evolution 10
FAIR Data, Workflows, and Research 25
Genome Annotation 25
Imaging 13
Materials Science 1
Microbiome 28
One Health 9
Plants 10
Statistics and machine learning 34
Visualisation 5

Methodologies

Topic Tutorials
Assembly 21
ELIXIR 16
Epigenetics 10
GMOD 14
Metabolomics 10
Proteomics 41
Sequence analysis 10
Single Cell 39
Synthetic Biology 3
Transcriptomics 25
Variant Analysis 18

Galaxy for Developers and Admins

Topic Tutorials
Galaxy Server administration 55
Development in Galaxy 24

How to contribute?

First off, thanks for taking the time to contribute!

You can report mistakes or errors, create more contents, etc. Whatever is your background, there is probably a way to do it: via the GitHub website, via command-line. If you feel it is too much, you can even write it with any text editor and contact us: we will work together to integrate it.

To get you started, check our dedicated tutorials or our Frequently Asked Questions

Galaxy for Contributors and Instructors

Topic Tutorials
Galaxy Community Building 8
Contributing to the Galaxy Training Material 23
Teaching and Hosting Galaxy training 17

Contributor Hall of Fame

514
Contributors
35
Topics
499
Tutorials
10.6
Years

This project would not be possible without the many amazing community contributors!

View the Hall of Fame View all GTN stats

Do you want to help with this project and join our Hall of Fame? Please see our dedicated tutorials or our Frequently Asked Questions to get you started.

Acknowledgment and Funding

More information about this project can be found in our publication in PLOS Computational Biology. We would like to thank all contributors to our Galaxy training materials, the Galaxy community for their constant support, and our funding sources:

AI4Life
ACME
BioNT
BeYond-COVID
CINECA
CORBEL
EOSC Data Commons
ELIXIR-CONVERGE
EDCTP-EU
DASH UK
EOSC-Life
EPSRC/OU
EuroScienceGateway
Fair-Ease
FNSO
Gallantries
DEFEND
HealthyCloud
NFDI4Bioimage
NFDI4Culture
DataPLANT
NFDI4Microbiota
NHGRI ANVIL
NHGRI GDS Community Network
OSCARS
Skills4SEOSC
Example organisation
ABRomics
Antarctic and Southern Ocean Coalition
Australian BioCommons
Avans
Amazon Web Services
Bioconda
BioDATEN
Biolytix AG
Bundesministerium für Bildung und Forschung
cesnet
The Carpentries
Collaborative Research Centre 1425
Collaborative Research Centre 992
Das Deutsche Kompetenzzentrum Cloud-Technologien für Datenmanagement und -verarbeitung
DATA TERRA
DECHEMA
Data Science Center
EIRENE RI
ELIXIR Czech
European Space Agency
Euro-BioImaging
GalaxyWorks
GigaScience
Image Data Resource
IFREMER
JXTX Foundation
KWS
Limagrain
Melbourne Bioinformatics
Nationale Forschungsdateninfrastruktur
University of Bremen
de.NBI
de.KCD
DFG
Earlham Institute
EDCTP
EGI
ELIXIR Excelerate
ELIXIR Europe
Goblet
EMBL-EBI
EPFL
ErasmusMC
EU
FAIR2Adapt
OSCARS-FIESTA
FIND
FZJ
GIS
GBIF
HZI
IFB
INAB|CERTH
IRCCS
JetStream
JHU
LINQ
MAdLand
Melbourne Bioinformatics
MetaboHUB
Moffitt Cancer Center
UMN
MPIEE
MWK
NCBI
NIH
NSF
OU
PanACEA
PANGenS
University of Isfahan
UPCité
PeterMac
PNDB
PSU
QIIME2
RFMF
SANBI/UWC
UniSR
Sciensano
CRC992
SPUN
🖖🏾SPOC
SwissTPH
SURF
TB-CAPT
UGA
UKRI-MRC
UFR
University of Graz
University of Manchester
The University of Melbourne
UTas
VIB
Worfklow4Metabelomics
Workflow Hub