R version 4.3.2 (2023-10-31) Platform: x86_64-conda-linux-gnu (64-bit) Running under: Rocky Linux 9.3 (Blue Onyx) Matrix products: default BLAS/LAPACK: /usr/local/tools/_conda/envs/mulled-v1-56a45d2bca658b338c4da1f3e6849892eb3debc0e50abb4c3d9fd444472ca34b/lib/libopenblasp-r0.3.26.so; LAPACK version 3.12.0 locale: [1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8 [4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C [10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C time zone: Europe/Berlin tzcode source: system (glibc) attached base packages: [1] splines stats graphics grDevices utils datasets methods [8] base other attached packages: [1] gplots_3.1.3.1 getopt_1.20.4 scales_1.3.0 edgeR_4.0.2 limma_3.58.1 [6] statmod_1.5.0 loaded via a namespace (and not attached): [1] utf8_1.2.4 SparseArray_1.2.2 [3] bitops_1.0-7 KernSmooth_2.23-22 [5] DESeq2_1.42.0 gtools_3.9.5 [7] lattice_0.22-5 magrittr_2.0.3 [9] digest_0.6.34 caTools_1.18.2 [11] grid_4.3.2 fastmap_1.1.1 [13] jsonlite_1.8.8 Matrix_1.6-5 [15] GenomeInfoDb_1.38.1 fansi_1.0.6 [17] codetools_0.2-19 abind_1.4-5 [19] cli_3.6.2 rlang_1.1.3 [21] crayon_1.5.2 XVector_0.42.0 [23] Biobase_2.62.0 munsell_0.5.0 [25] DelayedArray_0.28.0 S4Arrays_1.2.0 [27] tools_4.3.2 parallel_4.3.2 [29] BiocParallel_1.36.0 colorspace_2.1-0 [31] ggplot2_3.4.4 locfit_1.5-9.8 [33] GenomeInfoDbData_1.2.11 SummarizedExperiment_1.32.0 [35] BiocGenerics_0.48.1 vctrs_0.6.5 [37] R6_2.5.1 matrixStats_1.2.0 [39] stats4_4.3.2 lifecycle_1.0.4 [41] zlibbioc_1.48.0 S4Vectors_0.40.2 [43] htmlwidgets_1.6.4 IRanges_2.36.0 [45] Glimma_2.12.0 pkgconfig_2.0.3 [47] pillar_1.9.0 gtable_0.3.4 [49] glue_1.7.0 Rcpp_1.0.12 [51] tibble_3.2.1 GenomicRanges_1.54.1 [53] MatrixGenerics_1.14.0 farver_2.1.1 [55] htmltools_0.5.7 compiler_4.3.2 [57] RCurl_1.98-1.14