Information for 11-CGTANATA (Motif 30)

G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
Reverse Opposite:
G C A T G C T A G A C T T C A G C A G T C G T A G T A C C T A G
p-value:1e-3
log p-value:-8.494e+00
Information Content per bp:1.535
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif16.32%
Number of Background Sequences with motif5327.0
Percentage of Background Sequences with motif10.92%
Average Position of motif in Targets99.8 +/- 52.7bp
Average Position of motif in Background98.8 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CGTANATA
NNDCCGTACDNN
 A C G T A C G T A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
C G A T C A T G C G A T G A T C G T A C A C T G A C G T C G T A A G T C C T G A C G T A G C A T

SPL12/MA1057.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CGTANATA
NCCGTACN--
 A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
C G T A G A T C T G A C C A T G A C G T T C G A A G T C G C T A A C G T A C G T

bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CGTANATA-
DTCCGTACADDN
 A C G T A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A A C G T
C T A G C G A T G A T C A G T C A C T G A C G T C G T A A G T C T C G A C G T A C G A T G A C T

UPC2/MA0411.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGTANATA
TCGTATA--
 A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
A G C T A G T C A C T G A C G T C G T A G A C T T C G A A C G T A C G T

SPL4/MA1058.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGTANATA
NNCCGTACN--
 A C G T A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
C G T A C G T A G A T C G A T C C T A G A C G T C T G A G A T C C T A G A C G T A C G T

SPL14/MA0586.2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGTANATA-
TCCGTACAATT
 A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A A C G T
C G A T G A T C A G T C A C T G A C G T C G T A A G T C T C G A C G T A G C A T C G A T

SPL13/MA1321.1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGTANATA
NTCCGTACAAT
 A C G T A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
C G T A C G A T G A T C T G A C A C T G A C G T C G T A A G T C T C G A C G T A G C A T

Hrp1p(RRM)/Saccharomyces_cerevisiae-RNCMPT00031-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGTANATA
-CTACATA
 G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
A C G T A G T C A C G T C G T A A G T C C T G A A C G T C G T A

ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGTANATA
ATCGTAAAAT
 A C G T A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A
G T C A G C A T A G T C A C T G A G C T C G T A C G T A C G T A G C T A G A C T

SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGTANATA-
HYGTACDTWH
 A C G T G A T C C A T G G C A T G T C A A G T C C T G A C G A T C G T A A C G T
G T A C G A T C C T A G C G A T G T C A G T A C C T A G C A G T G C A T G A C T