##FastQC 0.12.1 >>Basic Statistics pass #Measure Value Filename A3_right_fq_gz.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10000 Total Bases 1 Mbp Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.9882 34.0 33.0 34.0 31.0 34.0 2 33.1593 34.0 33.0 34.0 31.0 34.0 3 33.1522 34.0 34.0 34.0 31.0 34.0 4 36.3928 37.0 37.0 37.0 35.0 37.0 5 36.4488 37.0 37.0 37.0 35.0 37.0 6 36.3758 37.0 37.0 37.0 35.0 37.0 7 36.413 37.0 37.0 37.0 35.0 37.0 8 36.487 37.0 37.0 37.0 35.0 37.0 9 38.3212 39.0 39.0 39.0 37.0 39.0 10-11 38.270399999999995 39.0 39.0 39.0 37.0 39.0 12-13 38.18875 39.0 39.0 39.0 37.0 39.0 14-15 39.82425 41.0 40.0 41.0 38.0 41.0 16-17 39.744150000000005 41.0 40.0 41.0 38.0 41.0 18-19 39.66385 41.0 40.0 41.0 38.0 41.0 20-21 39.56235 41.0 40.0 41.0 37.5 41.0 22-23 39.42325 41.0 40.0 41.0 37.0 41.0 24-25 39.3334 41.0 40.0 41.0 37.0 41.0 26-27 39.4187 41.0 40.0 41.0 37.0 41.0 28-29 39.211749999999995 41.0 40.0 41.0 36.0 41.0 30-31 39.0338 41.0 39.0 41.0 36.0 41.0 32-33 38.7948 41.0 39.0 41.0 35.0 41.0 34-35 38.84415 41.0 39.0 41.0 35.0 41.0 36-37 38.78535 41.0 39.0 41.0 35.0 41.0 38-39 38.5202 40.0 38.5 41.0 35.0 41.0 40-41 38.27885 40.0 38.0 41.0 34.5 41.0 42-43 38.2072 40.0 38.0 41.0 34.0 41.0 44-45 38.02945 40.0 38.0 41.0 33.5 41.0 46-47 37.7227 40.0 37.5 41.0 33.0 41.0 48-49 37.57925 40.0 37.0 41.0 33.0 41.0 50-51 36.7672 39.0 36.0 40.0 32.0 40.5 52-53 37.0481 39.5 36.5 40.5 32.5 40.5 54-55 37.464200000000005 40.0 36.0 41.0 33.0 41.0 56-57 37.26835 40.0 36.0 41.0 33.0 41.0 58-59 37.079750000000004 40.0 35.0 41.0 32.5 41.0 60-61 36.7992 39.0 35.0 41.0 32.0 41.0 62-63 36.47725 39.0 35.0 41.0 31.5 41.0 64-65 36.1221 38.5 35.0 41.0 31.0 41.0 66-67 35.781099999999995 37.5 35.0 40.5 30.5 41.0 68-69 35.339749999999995 37.0 35.0 40.0 30.0 41.0 70-71 34.89295 36.0 34.5 39.0 29.0 41.0 72-73 34.515299999999996 36.0 34.0 39.0 29.0 41.0 74-75 34.024 35.0 34.0 38.5 28.5 40.0 76-77 33.61325 35.0 34.0 37.0 28.0 39.0 78-79 33.1251 35.0 33.5 37.0 27.0 39.0 80-81 32.5814 35.0 33.0 36.5 25.5 38.5 82-83 32.21495 35.0 33.0 36.0 25.0 37.0 84-85 31.8366 35.0 33.0 35.5 24.5 37.0 86-87 31.45265 35.0 32.0 35.0 23.0 36.5 88-89 31.17925 35.0 32.0 35.0 21.5 36.0 90-91 30.86775 35.0 32.0 35.0 20.0 36.0 92-93 30.46075 34.0 31.0 35.0 18.5 36.0 94-95 30.1308 34.0 31.0 35.0 12.5 35.0 96-97 29.6774 34.0 30.5 35.0 2.0 35.0 98-99 29.134549999999997 34.0 30.0 35.0 2.0 35.0 100-101 26.666 32.0 25.0 34.5 2.0 35.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 1101 1 0.0 1101 2 0.0 1101 3 0.0 1101 4 0.0 1101 5 0.0 1101 6 0.0 1101 7 0.0 1101 8 0.0 1101 9 0.0 1101 10-11 0.0 1101 12-13 0.0 1101 14-15 0.0 1101 16-17 0.0 1101 18-19 0.0 1101 20-21 0.0 1101 22-23 0.0 1101 24-25 0.0 1101 26-27 0.0 1101 28-29 0.0 1101 30-31 0.0 1101 32-33 0.0 1101 34-35 0.0 1101 36-37 0.0 1101 38-39 0.0 1101 40-41 0.0 1101 42-43 0.0 1101 44-45 0.0 1101 46-47 0.0 1101 48-49 0.0 1101 50-51 0.0 1101 52-53 0.0 1101 54-55 0.0 1101 56-57 0.0 1101 58-59 0.0 1101 60-61 0.0 1101 62-63 0.0 1101 64-65 0.0 1101 66-67 0.0 1101 68-69 0.0 1101 70-71 0.0 1101 72-73 0.0 1101 74-75 0.0 1101 76-77 0.0 1101 78-79 0.0 1101 80-81 0.0 1101 82-83 0.0 1101 84-85 0.0 1101 86-87 0.0 1101 88-89 0.0 1101 90-91 0.0 1101 92-93 0.0 1101 94-95 0.0 1101 96-97 0.0 1101 98-99 0.0 1101 100-101 0.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 12.0 3 0.0 4 9.0 5 14.0 6 4.0 7 11.0 8 12.0 9 17.0 10 6.0 11 13.0 12 17.0 13 14.0 14 13.0 15 19.0 16 17.0 17 27.0 18 20.0 19 28.0 20 37.0 21 23.0 22 31.0 23 49.0 24 50.0 25 65.0 26 65.0 27 79.0 28 82.0 29 115.0 30 127.0 31 183.0 32 218.0 33 305.0 34 502.0 35 737.0 36 1203.0 37 2042.0 38 2993.0 39 840.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.060000000000002 12.2 11.690000000000001 52.05 2 21.418553396113 20.90763374073332 38.29893808855941 19.374874774594268 3 25.78610054075706 23.583016222711798 24.494292008812337 26.13659122771881 4 26.36955433149725 31.25688532799199 18.207310966449676 24.166249374061092 5 27.41289547456948 30.997196635963153 21.245494593512216 20.344413295955146 6 21.87 33.879999999999995 21.69 22.56 7 19.439999999999998 16.28 40.0 24.279999999999998 8 20.93 21.83 28.63 28.610000000000003 9 20.89 21.26 31.77 26.08 10-11 25.374999999999996 30.075000000000003 21.16 23.39 12-13 22.81 23.565 27.944999999999997 25.679999999999996 14-15 23.91 25.259999999999998 26.755000000000003 24.075 16-17 24.39 25.779999999999998 25.25 24.58 18-19 24.240000000000002 25.82 25.22 24.72 20-21 24.825 25.814999999999998 25.255 24.104999999999997 22-23 24.195 26.015 25.35 24.44 24-25 24.04 26.169999999999998 25.655 24.135 26-27 23.7 26.195 25.705 24.4 28-29 24.135 25.759999999999998 25.255 24.85 30-31 24.305 25.215 25.919999999999998 24.560000000000002 32-33 24.560000000000002 26.009999999999998 25.745 23.685000000000002 34-35 24.825 25.385 25.435000000000002 24.355 36-37 24.104999999999997 26.009999999999998 25.415 24.47 38-39 24.765 26.435 25.09 23.71 40-41 24.235 25.27 25.995 24.5 42-43 24.285 25.605 25.755 24.355 44-45 23.745 25.795 25.89 24.57 46-47 24.01 25.759999999999998 25.805 24.425 48-49 24.16 25.979999999999997 25.75 24.11 50-51 24.52 26.035000000000004 25.224999999999998 24.22 52-53 24.34 25.480000000000004 25.369999999999997 24.81 54-55 24.05 25.81 25.82 24.32 56-57 23.775 26.255 25.480000000000004 24.490000000000002 58-59 24.26 26.005 25.180000000000003 24.555 60-61 24.625 25.674999999999997 25.21 24.490000000000002 62-63 24.075 26.075 25.255 24.595 64-65 25.27 25.395 24.795 24.54 66-67 24.365000000000002 25.94 25.47 24.224999999999998 68-69 24.884999999999998 25.52 25.564999999999998 24.03 70-71 24.185000000000002 25.205 25.955000000000002 24.654999999999998 72-73 24.46 25.64 25.635 24.265 74-75 24.395 25.44 25.22 24.945 76-77 24.44 25.655 25.865 24.04 78-79 24.865000000000002 25.61 25.135 24.39 80-81 24.785 25.724999999999998 25.480000000000004 24.01 82-83 24.47 25.6 25.39 24.54 84-85 24.88 25.185000000000002 25.564999999999998 24.37 86-87 24.455 25.064999999999998 25.779999999999998 24.7 88-89 24.545 25.430000000000003 25.629999999999995 24.395 90-91 24.88 25.495 24.89 24.735 92-93 24.245 25.314999999999998 26.135 24.305 94-95 24.6 24.990000000000002 25.52 24.89 96-97 24.32 26.36 25.240000000000002 24.08 98-99 24.585 25.869999999999997 25.369999999999997 24.175 100-101 25.540000000000003 25.174999999999997 24.95 24.335 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 1.0 12 0.5 13 0.0 14 0.0 15 0.0 16 0.5 17 1.0 18 1.0 19 2.5 20 3.5 21 4.5 22 6.0 23 9.0 24 12.0 25 19.0 26 25.5 27 29.5 28 47.5 29 63.5 30 68.5 31 86.0 32 108.0 33 127.0 34 140.5 35 170.0 36 197.0 37 196.0 38 219.0 39 254.5 40 255.5 41 277.0 42 349.0 43 402.0 44 414.0 45 412.5 46 420.0 47 418.0 48 406.5 49 371.0 50 343.5 51 361.5 52 349.5 53 305.0 54 266.0 55 251.0 56 243.0 57 219.5 58 194.5 59 161.5 60 134.5 61 126.0 62 132.5 63 132.0 64 125.0 65 123.5 66 128.5 67 125.5 68 116.5 69 117.0 70 94.0 71 69.0 72 56.5 73 48.5 74 48.0 75 39.0 76 31.0 77 27.5 78 20.5 79 16.5 80 11.5 81 9.5 82 11.0 83 10.5 84 8.5 85 5.0 86 4.5 87 3.5 88 2.0 89 1.0 90 0.5 91 0.5 92 1.5 93 2.0 94 1.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.18 3 0.13999999999999999 4 0.15 5 0.12 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 10000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 95.48 #Duplication Level Percentage of total 1 92.25 2 5.06 3 1.17 4 0.6799999999999999 5 0.4 6 0.06 7 0.21 8 0.08 9 0.09 >10 0.0 >50 0.0 >100 0.0 >500 0.0 >1k 0.0 >5k 0.0 >10k+ 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence PolyA PolyG 1 0.0 0.0 0.0 0.0 0.04 0.0 2 0.0 0.0 0.0 0.0 0.04 0.0 3 0.0 0.0 0.0 0.0 0.04 0.0 4 0.0 0.0 0.0 0.0 0.04 0.0 5 0.0 0.0 0.0 0.0 0.04 0.0 6 0.0 0.0 0.0 0.0 0.04 0.0 7 0.0 0.0 0.0 0.0 0.04 0.0 8 0.0 0.0 0.0 0.0 0.05 0.0 9 0.0 0.0 0.0 0.0 0.06 0.0 10-11 0.0 0.0 0.0 0.0 0.06 0.0 12-13 0.0 0.0 0.0 0.0 0.07 0.0 14-15 0.0 0.0 0.0 0.0 0.08499999999999999 0.0 16-17 0.0 0.0 0.0 0.0 0.1 0.0 18-19 0.0 0.0 0.0 0.0 0.12 0.0 20-21 0.0 0.0 0.0 0.0 0.135 0.0 22-23 0.01 0.0 0.0 0.0 0.15 0.0 24-25 0.01 0.0 0.0 0.0 0.16 0.01 26-27 0.01 0.0 0.0 0.0 0.16 0.01 28-29 0.01 0.0 0.0 0.0 0.17 0.015 30-31 0.01 0.0 0.0 0.0 0.18 0.02 32-33 0.01 0.0 0.0 0.0 0.18 0.02 34-35 0.01 0.0 0.0 0.0 0.21 0.035 36-37 0.01 0.0 0.0 0.0 0.21 0.05 38-39 0.01 0.0 0.0 0.0 0.215 0.05 40-41 0.01 0.0 0.0 0.0 0.22 0.065 42-43 0.01 0.0 0.0 0.0 0.24 0.07 44-45 0.01 0.0 0.0 0.0 0.25 0.09 46-47 0.01 0.0 0.0 0.0 0.25 0.09 48-49 0.01 0.0 0.0 0.0 0.255 0.09 50-51 0.01 0.0 0.0 0.0 0.26 0.1 52-53 0.01 0.0 0.0 0.0 0.265 0.1 54-55 0.01 0.0 0.0 0.0 0.28 0.1 56-57 0.01 0.0 0.0 0.0 0.3 0.1 58-59 0.01 0.0 0.0 0.0 0.31 0.11 60-61 0.01 0.0 0.0 0.0 0.32 0.13 62-63 0.01 0.0 0.0 0.0 0.33 0.14500000000000002 64-65 0.01 0.0 0.0 0.0 0.33999999999999997 0.15 66-67 0.01 0.0 0.0 0.0 0.36 0.17 68-69 0.01 0.0 0.0 0.0 0.36 0.17 70-71 0.01 0.0 0.0 0.0 0.36 0.17 72-73 0.01 0.0 0.0 0.0 0.36 0.18 74-75 0.01 0.0 0.0 0.0 0.365 0.185 76-77 0.02 0.0 0.0 0.0 0.385 0.2 78-79 0.02 0.0 0.0 0.0 0.39 0.21 80-81 0.02 0.0 0.0 0.0 0.39 0.21 82-83 0.02 0.0 0.0 0.0 0.4 0.225 84-85 0.02 0.0 0.0 0.0 0.42 0.23 86-87 0.02 0.0 0.0 0.0 0.42 0.265 88-89 0.02 0.0 0.0 0.0 0.42 0.295 90 0.02 0.0 0.0 0.0 0.44 0.3 >>END_MODULE