##FastQC 0.12.1 >>Basic Statistics pass #Measure Value Filename A1_left_fq_gz.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10000 Total Bases 1 Mbp Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.8798 34.0 31.0 34.0 31.0 34.0 2 32.9296 34.0 33.0 34.0 31.0 34.0 3 33.0536 34.0 33.0 34.0 31.0 34.0 4 36.4594 37.0 37.0 37.0 35.0 37.0 5 36.3884 37.0 37.0 37.0 35.0 37.0 6 36.3379 37.0 37.0 37.0 35.0 37.0 7 36.3663 37.0 37.0 37.0 35.0 37.0 8 36.2895 37.0 37.0 37.0 35.0 37.0 9 38.1358 39.0 39.0 39.0 37.0 39.0 10-11 38.1194 39.0 39.0 39.0 37.0 39.0 12-13 38.045950000000005 39.0 38.5 39.0 35.0 39.0 14-15 39.567750000000004 41.0 40.0 41.0 36.5 41.0 16-17 39.5634 41.0 40.0 41.0 37.0 41.0 18-19 39.5389 41.0 39.5 41.0 37.0 41.0 20-21 39.31715 41.0 39.0 41.0 36.0 41.0 22-23 39.344899999999996 41.0 39.0 41.0 36.0 41.0 24-25 39.2448 41.0 39.0 41.0 36.0 41.0 26-27 39.07485 41.0 39.0 41.0 35.5 41.0 28-29 38.85435 40.5 39.0 41.0 35.0 41.0 30-31 38.5847 40.0 38.0 41.0 34.5 41.0 32-33 38.383300000000006 40.0 38.0 41.0 34.0 41.0 34-35 38.35105 40.0 38.0 41.0 34.0 41.0 36-37 38.1601 40.0 38.0 41.0 33.0 41.0 38-39 37.964 40.0 38.0 41.0 33.0 41.0 40-41 37.634100000000004 40.0 37.0 41.0 32.0 41.0 42-43 37.53125 40.0 37.0 41.0 32.0 41.0 44-45 37.2863 40.0 36.5 41.0 31.5 41.0 46-47 36.91905 39.5 36.0 41.0 30.5 41.0 48-49 36.8743 40.0 36.0 41.0 31.0 41.0 50-51 36.703 40.0 36.0 41.0 31.0 41.0 52-53 36.67585 39.5 35.0 41.0 30.5 41.0 54-55 36.6743 39.0 35.0 41.0 30.5 41.0 56-57 36.61935 39.0 35.0 41.0 31.0 41.0 58-59 36.472899999999996 39.0 35.0 41.0 31.0 41.0 60-61 36.217349999999996 39.0 35.0 41.0 31.0 41.0 62-63 35.85165 38.0 35.0 41.0 29.5 41.0 64-65 35.373400000000004 37.0 34.5 40.0 29.0 41.0 66-67 34.8964 37.0 34.0 40.0 28.0 41.0 68-69 34.6374 36.0 34.0 39.5 28.0 41.0 70-71 34.215599999999995 36.0 34.0 39.0 27.0 41.0 72-73 33.893950000000004 35.0 33.5 39.0 26.5 40.5 74-75 33.498850000000004 35.0 33.0 37.5 26.0 40.0 76-77 32.3094 34.5 31.5 36.5 25.0 39.0 78-79 32.8989 35.0 33.0 37.0 26.0 39.0 80-81 32.54325 35.0 33.0 36.0 25.5 38.5 82-83 32.1053 35.0 33.0 36.0 24.5 37.0 84-85 31.892400000000002 35.0 32.5 35.5 24.5 37.0 86-87 31.667050000000003 35.0 32.5 35.0 24.0 36.5 88-89 31.45975 35.0 33.0 35.0 23.5 36.0 90-91 31.15775 35.0 32.0 35.0 21.5 36.0 92-93 30.786099999999998 35.0 32.0 35.0 20.0 36.0 94-95 30.61995 35.0 32.0 35.0 18.5 35.0 96-97 30.285 35.0 31.0 35.0 14.0 35.0 98-99 29.9541 34.5 31.0 35.0 2.0 35.0 100-101 29.1956 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per tile sequence quality pass #Tile Base Mean 1101 1 0.0 1101 2 0.0 1101 3 0.0 1101 4 0.0 1101 5 0.0 1101 6 0.0 1101 7 0.0 1101 8 0.0 1101 9 0.0 1101 10-11 0.0 1101 12-13 0.0 1101 14-15 0.0 1101 16-17 0.0 1101 18-19 0.0 1101 20-21 0.0 1101 22-23 0.0 1101 24-25 0.0 1101 26-27 0.0 1101 28-29 0.0 1101 30-31 0.0 1101 32-33 0.0 1101 34-35 0.0 1101 36-37 0.0 1101 38-39 0.0 1101 40-41 0.0 1101 42-43 0.0 1101 44-45 0.0 1101 46-47 0.0 1101 48-49 0.0 1101 50-51 0.0 1101 52-53 0.0 1101 54-55 0.0 1101 56-57 0.0 1101 58-59 0.0 1101 60-61 0.0 1101 62-63 0.0 1101 64-65 0.0 1101 66-67 0.0 1101 68-69 0.0 1101 70-71 0.0 1101 72-73 0.0 1101 74-75 0.0 1101 76-77 0.0 1101 78-79 0.0 1101 80-81 0.0 1101 82-83 0.0 1101 84-85 0.0 1101 86-87 0.0 1101 88-89 0.0 1101 90-91 0.0 1101 92-93 0.0 1101 94-95 0.0 1101 96-97 0.0 1101 98-99 0.0 1101 100-101 0.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 5.0 9 5.0 10 18.0 11 29.0 12 16.0 13 21.0 14 22.0 15 28.0 16 29.0 17 35.0 18 22.0 19 25.0 20 26.0 21 33.0 22 46.0 23 48.0 24 64.0 25 57.0 26 78.0 27 78.0 28 133.0 29 149.0 30 169.0 31 240.0 32 283.0 33 366.0 34 532.0 35 746.0 36 1221.0 37 1987.0 38 2659.0 39 826.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.27 13.569999999999999 12.959999999999999 49.2 2 20.801124385101897 21.142455576749324 38.0684670213834 19.987953016765385 3 24.779999999999998 24.63 25.130000000000003 25.46 4 24.88 31.16 19.96 24.0 5 27.58 31.990000000000002 20.41 20.02 6 20.75 33.33 22.29 23.630000000000003 7 19.259999999999998 15.73 39.72 25.290000000000003 8 21.48 21.3 27.61 29.609999999999996 9 20.22011005502751 21.180590295147574 31.355677838919462 27.243621810905456 10-11 25.665 29.099999999999998 20.849999999999998 24.385 12-13 23.465 22.62 27.900000000000002 26.015 14-15 24.169999999999998 24.535 26.855 24.44 16-17 25.779999999999998 24.95 24.51 24.759999999999998 18-19 24.355 25.335 25.929999999999996 24.38 20-21 25.490000000000002 24.875 25.624999999999996 24.01 22-23 25.025 25.31 25.305 24.36 24-25 24.735 25.7 25.080000000000002 24.485 26-27 25.080000000000002 25.365 25.985000000000003 23.57 28-29 24.3064596895343 24.917376064096146 26.06910365548322 24.70706059088633 30-31 24.07890774018673 25.75042666398956 25.74038751129405 24.430278084529668 32-33 24.05 26.115 25.629999999999995 24.205 34-35 24.62 25.380000000000003 25.290000000000003 24.709999999999997 36-37 24.09 25.724999999999998 25.41 24.775 38-39 24.85 25.405 25.41 24.335 40-41 24.955 25.53 24.725 24.79 42-43 24.635 25.35 25.47 24.545 44-45 24.58 25.15 26.31 23.96 46-47 24.63288728512003 25.214253495714928 25.815666817019995 24.337192402145043 48-49 24.16185556568419 25.281069583713155 25.31145548465512 25.245619365947537 50-51 24.481622306717362 25.804816223067174 25.368821292775667 24.344740177439796 52-53 25.424748158171706 24.778228837768758 25.04886483235604 24.7481581717035 54-55 24.6 25.380000000000003 25.580000000000002 24.44 56-57 24.695 25.715 25.385 24.205 58-59 24.84 25.259999999999998 25.46 24.44 60-61 24.81 25.045 25.255 24.89 62-63 24.27 25.395 26.19 24.145 64-65 24.615000000000002 24.855 25.8 24.73 66-67 24.86 24.995 25.669999999999998 24.474999999999998 68-69 24.31620078148482 25.583608856827972 25.648732591924656 24.45145776976255 70-71 24.86 25.240000000000002 25.4 24.5 72-73 24.709999999999997 25.095 25.545 24.65 74-75 24.63 25.285000000000004 25.645 24.44 76-77 25.16 25.119999999999997 25.085 24.635 78-79 24.779999999999998 25.69 25.15 24.38 80-81 24.224999999999998 25.345000000000002 25.685000000000002 24.745 82-83 24.785 25.424999999999997 25.06 24.73 84-85 24.560000000000002 25.45 25.0 24.990000000000002 86-87 24.62 25.61 25.669999999999998 24.099999999999998 88-89 24.805 25.045 25.124999999999996 25.025 90-91 24.25 25.05 25.490000000000002 25.21 92-93 24.48 25.2 25.635 24.685000000000002 94-95 25.069999999999997 24.795 25.16 24.975 96-97 24.6 25.615 25.040000000000003 24.745 98-99 24.72 25.72 24.955 24.605 100-101 25.025 24.685000000000002 25.455 24.834999999999997 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.5 15 1.0 16 0.5 17 2.0 18 3.0 19 1.0 20 2.5 21 5.0 22 5.5 23 7.5 24 11.5 25 21.0 26 29.0 27 32.0 28 41.5 29 58.0 30 76.5 31 96.0 32 108.0 33 123.0 34 136.5 35 155.5 36 182.0 37 207.0 38 233.5 39 254.5 40 261.5 41 286.0 42 332.0 43 390.0 44 398.0 45 383.5 46 404.5 47 404.0 48 375.5 49 368.0 50 353.5 51 332.0 52 319.5 53 288.5 54 281.0 55 242.0 56 203.0 57 210.0 58 203.0 59 180.5 60 162.0 61 158.5 62 150.0 63 142.5 64 142.0 65 136.0 66 143.5 67 142.0 68 134.5 69 123.5 70 100.5 71 71.0 72 53.5 73 56.5 74 48.5 75 37.0 76 32.5 77 26.5 78 27.5 79 24.5 80 14.5 81 12.5 82 11.5 83 7.0 84 7.0 85 7.5 86 4.5 87 1.0 88 1.5 89 2.0 90 0.5 91 1.5 92 2.0 93 0.5 94 0.5 95 1.5 96 1.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.38999999999999996 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.05 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.15 30-31 0.38999999999999996 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.23500000000000001 48-49 1.27 50-51 1.375 52-53 0.23500000000000001 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.19 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 10000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 97.53 #Duplication Level Percentage of total 1 95.50999999999999 2 3.4000000000000004 3 0.72 4 0.2 5 0.05 6 0.12 7 0.0 8 0.0 9 0.0 >10 0.0 >50 0.0 >100 0.0 >500 0.0 >1k 0.0 >5k 0.0 >10k+ 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence PolyA PolyG 1 0.0 0.0 0.0 0.0 0.02 0.0 2 0.0 0.0 0.0 0.0 0.02 0.0 3 0.0 0.0 0.0 0.0 0.02 0.0 4 0.0 0.0 0.0 0.0 0.02 0.0 5 0.0 0.0 0.0 0.0 0.02 0.0 6 0.0 0.0 0.0 0.0 0.02 0.0 7 0.0 0.0 0.0 0.0 0.02 0.0 8 0.0 0.0 0.0 0.0 0.03 0.0 9 0.0 0.0 0.0 0.0 0.03 0.0 10-11 0.0 0.0 0.0 0.0 0.04 0.0 12-13 0.0 0.0 0.0 0.0 0.045 0.0 14-15 0.0 0.0 0.0 0.0 0.06 0.0 16-17 0.0 0.0 0.0 0.0 0.08 0.0 18-19 0.0 0.0 0.0 0.0 0.09 0.0 20-21 0.0 0.0 0.0 0.0 0.095 0.0 22-23 0.0 0.0 0.0 0.0 0.10500000000000001 0.0 24-25 0.0 0.0 0.0 0.0 0.11 0.0 26-27 0.0 0.0 0.0 0.0 0.12 0.0 28-29 0.0 0.0 0.0 0.0 0.15 0.0 30-31 0.01 0.0 0.0 0.0 0.16 0.0 32-33 0.01 0.0 0.0 0.0 0.18 0.0 34-35 0.01 0.0 0.0 0.0 0.18 0.01 36-37 0.015 0.0 0.0 0.0 0.18 0.01 38-39 0.02 0.0 0.0 0.0 0.19 0.01 40-41 0.02 0.0 0.0 0.0 0.2 0.01 42-43 0.02 0.0 0.0 0.0 0.2 0.01 44-45 0.02 0.0 0.0 0.0 0.20500000000000002 0.02 46-47 0.02 0.0 0.0 0.0 0.22499999999999998 0.02 48-49 0.02 0.0 0.0 0.0 0.245 0.025 50-51 0.02 0.0 0.0 0.0 0.27 0.05 52-53 0.02 0.0 0.0 0.0 0.28500000000000003 0.055 54-55 0.02 0.0 0.0 0.0 0.29 0.06 56-57 0.02 0.0 0.0 0.0 0.29 0.06 58-59 0.02 0.0 0.0 0.0 0.3 0.06 60-61 0.02 0.0 0.0 0.0 0.3 0.06 62-63 0.02 0.0 0.0 0.0 0.3 0.065 64-65 0.02 0.0 0.0 0.0 0.305 0.07 66-67 0.02 0.0 0.0 0.0 0.315 0.07 68-69 0.03 0.0 0.0 0.0 0.325 0.07500000000000001 70-71 0.03 0.0 0.0 0.0 0.335 0.08499999999999999 72-73 0.03 0.0 0.0 0.0 0.355 0.11 74-75 0.03 0.0 0.0 0.0 0.37 0.12 76-77 0.035 0.0 0.0 0.0 0.39 0.14500000000000002 78-79 0.04 0.0 0.0 0.0 0.4 0.165 80-81 0.04 0.0 0.0 0.0 0.4 0.17 82-83 0.04 0.0 0.0 0.0 0.405 0.18 84-85 0.04 0.0 0.0 0.0 0.415 0.18 86-87 0.04 0.0 0.0 0.0 0.435 0.21 88-89 0.04 0.0 0.0 0.0 0.45 0.21 90 0.04 0.0 0.0 0.0 0.46 0.22 >>END_MODULE