Discrepancy Report Results

Summary
FATAL: MISSING_PROTEIN_ID:2565 proteins have invalid IDs.
DISC_SOURCE_QUALS_ASNDISC:strain (all present, all same)
DISC_SOURCE_QUALS_ASNDISC:taxname (all present, all same)
DISC_FEATURE_COUNT:CDS: 2565 present
DISC_FEATURE_COUNT:tRNA: 68 present
DISC_FEATURE_COUNT:rRNA: 18 present
DISC_FEATURE_COUNT:tmRNA: 1 present
DISC_COUNT_NUCLEOTIDES:2 nucleotide Bioseqs are present
FEATURE_LOCATION_CONFLICT:2652 features have inconsistent gene locations.
OVERLAPPING_CDS:14 coding regions overlap another coding region with a similar or identical name.
SUSPECT_PRODUCT_NAMES:12 product_names contain suspect phrase or characters
	May contain database identifier more appropriate in note; remove from product name
		4 features contains three or more numbers together that may be identifiers more appropriate in note
		3 features Contains underscore
	use protein instead of gene as appropriate
		4 features contains 'gene'
		1 features contains 'genes'
DISC_QUALITY_SCORES:Quality scores are missing on all sequences.
ONCALLER_COMMENT_PRESENT:2 comment descriptors were found (all same)
SHORT_PROT_SEQUENCES:41 protein sequences are shorter than 50 aa.
MISSING_GENOMEASSEMBLY_COMMENTS:2 bioseqs are missing GenomeAssembly structured comments
MOLTYPE_NOT_MRNA:2 molecule types are not set as mRNA.
TECHNIQUE_NOT_TSA:2 technique are not set as TSA
MISSING_STRUCTURED_COMMENT:2 sequences do not include structured comments.
MISSING_PROJECT:2567 sequences do not include project.
DISC_INCONSISTENT_MOLINFO_TECH:Molinfo Technique Report (some missing, all same)


Detailed Report

FATAL: DiscRep_ALL:MISSING_PROTEIN_ID::2565 proteins have invalid IDs.
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outdir/prokka:contig_1_2461 (length 490)
outdir/prokka:contig_1_2462 (length 157)
outdir/prokka:contig_1_2463 (length 184)
outdir/prokka:contig_1_2464 (length 176)
outdir/prokka:contig_1_2465 (length 147)
outdir/prokka:contig_1_2466 (length 386)
outdir/prokka:contig_1_2467 (length 553)
outdir/prokka:contig_1_2468 (length 276)
outdir/prokka:contig_1_2469 (length 721)
outdir/prokka:contig_1_2470 (length 764)
outdir/prokka:contig_1_2471 (length 221)
outdir/prokka:contig_1_2472 (length 335)
outdir/prokka:contig_1_2473 (length 341)
outdir/prokka:contig_1_2474 (length 652)
outdir/prokka:contig_1_2475 (length 198)
outdir/prokka:contig_1_2476 (length 455)
outdir/prokka:contig_1_2477 (length 473)
outdir/prokka:contig_1_2478 (length 625)
outdir/prokka:contig_1_2479 (length 418)
outdir/prokka:contig_1_2480 (length 433)
outdir/prokka:contig_1_2481 (length 199)
outdir/prokka:contig_1_2482 (length 293)
outdir/prokka:contig_1_2483 (length 536)
outdir/prokka:contig_1_2484 (length 219)
outdir/prokka:contig_1_2485 (length 87)
outdir/prokka:contig_1_2486 (length 563)
outdir/prokka:contig_1_2487 (length 173)
outdir/prokka:contig_1_2488 (length 219)
outdir/prokka:contig_1_2489 (length 201)
outdir/prokka:contig_1_2490 (length 327)
outdir/prokka:contig_1_2491 (length 131)
outdir/prokka:contig_1_2492 (length 106)
outdir/prokka:contig_1_2493 (length 285)
outdir/prokka:contig_1_2494 (length 434)
outdir/prokka:contig_1_2495 (length 169)
outdir/prokka:contig_1_2496 (length 711)
outdir/prokka:contig_1_2497 (length 551)
outdir/prokka:contig_1_2498 (length 104)
outdir/prokka:contig_1_2499 (length 86)
outdir/prokka:contig_1_2500 (length 104)
outdir/prokka:contig_1_2501 (length 184)
outdir/prokka:contig_1_2502 (length 642)
outdir/prokka:contig_1_2503 (length 238)
outdir/prokka:contig_1_2504 (length 607)
outdir/prokka:contig_1_2505 (length 498)
outdir/prokka:contig_1_2506 (length 486)
outdir/prokka:contig_1_2507 (length 431)
outdir/prokka:contig_1_2508 (length 225)
outdir/prokka:contig_1_2509 (length 363)
outdir/prokka:contig_1_2510 (length 144)
outdir/prokka:contig_1_2511 (length 545)
outdir/prokka:contig_1_2512 (length 437)
outdir/prokka:contig_1_2513 (length 74)
outdir/prokka:contig_1_2514 (length 122)
outdir/prokka:contig_1_2515 (length 236)
outdir/prokka:contig_1_2516 (length 173)
outdir/prokka:contig_1_2517 (length 150)
outdir/prokka:contig_1_2518 (length 201)
outdir/prokka:contig_1_2519 (length 206)
outdir/prokka:contig_1_2520 (length 289)
outdir/prokka:contig_1_2521 (length 71)
outdir/prokka:contig_1_2522 (length 45)
outdir/prokka:contig_1_2523 (length 429)
outdir/prokka:contig_1_2524 (length 73)
outdir/prokka:contig_1_2525 (length 693)
outdir/prokka:contig_1_2526 (length 113)
outdir/prokka:contig_1_2527 (length 77)
outdir/prokka:contig_1_2528 (length 254)
outdir/prokka:contig_1_2529 (length 289)
outdir/prokka:contig_1_2530 (length 361)
outdir/prokka:contig_1_2531 (length 197)
outdir/prokka:contig_1_2532 (length 558)
outdir/prokka:contig_1_2533 (length 99)
outdir/prokka:contig_1_2534 (length 548)
outdir/prokka:contig_1_2535 (length 279)
outdir/prokka:contig_1_2536 (length 290)
outdir/prokka:contig_1_2537 (length 120)
outdir/prokka:contig_1_2538 (length 479)
outdir/prokka:contig_1_2539 (length 195)
outdir/prokka:contig_2_1 (length 126)
outdir/prokka:contig_2_2 (length 304)
outdir/prokka:contig_2_3 (length 229)
outdir/prokka:contig_2_4 (length 245)
outdir/prokka:contig_2_5 (length 178)
outdir/prokka:contig_2_6 (length 56)
outdir/prokka:contig_2_7 (length 103)
outdir/prokka:contig_2_8 (length 390)
outdir/prokka:contig_2_9 (length 38)
outdir/prokka:contig_2_10 (length 34)
outdir/prokka:contig_2_11 (length 567)
outdir/prokka:contig_2_12 (length 37)
outdir/prokka:contig_2_13 (length 67)
outdir/prokka:contig_2_14 (length 126)
outdir/prokka:contig_2_15 (length 304)
outdir/prokka:contig_2_16 (length 229)
outdir/prokka:contig_2_17 (length 245)
outdir/prokka:contig_2_18 (length 178)
outdir/prokka:contig_2_19 (length 56)
outdir/prokka:contig_2_20 (length 103)
outdir/prokka:contig_2_21 (length 390)
outdir/prokka:contig_2_22 (length 38)
outdir/prokka:contig_2_23 (length 34)
outdir/prokka:contig_2_24 (length 567)
outdir/prokka:contig_2_25 (length 37)
outdir/prokka:contig_2_26 (length 67)

DiscRep_ALL:DISC_SOURCE_QUALS_ASNDISC::strain (all present, all same)
DiscRep_SUB:DISC_SOURCE_QUALS_ASNDISC::2 sources have 'strain' for strain
DiscRep_ALL:DISC_SOURCE_QUALS_ASNDISC::taxname (all present, all same)
DiscRep_SUB:DISC_SOURCE_QUALS_ASNDISC::2 sources have 'Genus species' for taxname
DiscRep_ALL:DISC_FEATURE_COUNT::CDS: 2565 present
DiscRep_ALL:DISC_FEATURE_COUNT::tRNA: 68 present
DiscRep_ALL:DISC_FEATURE_COUNT::rRNA: 18 present
DiscRep_ALL:DISC_FEATURE_COUNT::tmRNA: 1 present
DiscRep_ALL:DISC_COUNT_NUCLEOTIDES::2 nucleotide Bioseqs are present
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_2 (length 19502)

DiscRep_ALL:FEATURE_LOCATION_CONFLICT::2652 features have inconsistent gene locations.
DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-serine/D-alanine/glycine transporter	contig_1:c2184-853	LDFNMNDI_00001

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glutamate/gamma-aminobutyrate antiporter	contig_1:c3628-2150	LDFNMNDI_00002

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Histidine decarboxylase	contig_1:c5770-3935	LDFNMNDI_00003

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:6240-7667	LDFNMNDI_00004

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c8193-7828	LDFNMNDI_00005

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c8555-8190	LDFNMNDI_00006

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:8987-9115	LDFNMNDI_00007

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oleate hydratase	contig_1:9172-10866	LDFNMNDI_00008

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c12252-11392	LDFNMNDI_00009

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative zinc-binding alcohol dehydrogenase	contig_1:12541-13674	LDFNMNDI_00010

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:13705-14019	LDFNMNDI_00011

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c14614-14156	LDFNMNDI_00012

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan permease IIC component	contig_1:c16090-14837	LDFNMNDI_00013

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan-specific phosphotransferase enzyme IIA component	contig_1:c16436-16119	LDFNMNDI_00014

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactose-specific EIIB component	contig_1:c16781-16461	LDFNMNDI_00015

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-phospho-beta-glucosidase GmuD	contig_1:c18509-17094	LDFNMNDI_00016

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system oligo-beta-mannoside-specific EIIC component	contig_1:c19842-18526	LDFNMNDI_00017

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator LutR	contig_1:c20690-19992	LDFNMNDI_00018

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-glyceraldehyde 3-phosphate reductase	contig_1:c21956-20967	LDFNMNDI_00019

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide methionine sulfoxide reductase MsrA	contig_1:c22866-22063	LDFNMNDI_00020

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA pseudouridine synthase A	contig_1:c23844-23101	LDFNMNDI_00021

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c24717-23980	LDFNMNDI_00022

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIC component	contig_1:c25968-24718	LDFNMNDI_00023

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIB component	contig_1:c26254-25973	LDFNMNDI_00024

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c26698-26267	LDFNMNDI_00025

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator ManR	contig_1:c28089-26695	LDFNMNDI_00026

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS4 family transposase IS4Bsu1	contig_1:c29460-28354	LDFNMNDI_00027

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c29712-29545	LDFNMNDI_00028

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c30567-29932	LDFNMNDI_00029

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine transporter SstT	contig_1:c31960-30719	LDFNMNDI_00030

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c32964-32269	LDFNMNDI_00031

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c33775-33233	LDFNMNDI_00032

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Copper chaperone CopZ	contig_1:c34007-33780	LDFNMNDI_00033

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cadmium-transporting ATPase	contig_1:c35225-34086	LDFNMNDI_00034

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative cadmium-transporting ATPase	contig_1:c35965-35210	LDFNMNDI_00035

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DagR	contig_1:36266-36586	LDFNMNDI_00036

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligo-1,6-glucosidase 1	contig_1:c37119-36781	LDFNMNDI_00037

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucan 1,6-alpha-glucosidase	contig_1:c38376-37120	LDFNMNDI_00038

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c40321-38366	LDFNMNDI_00039

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sucrose-6-phosphate hydrolase	contig_1:40550-42028	LDFNMNDI_00040

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor PurR	contig_1:42041-43024	LDFNMNDI_00041

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative fructokinase	contig_1:43046-43927	LDFNMNDI_00042

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c45141-44587	LDFNMNDI_00043

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c46285-45242	LDFNMNDI_00044

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Organic hydroperoxide resistance protein OhrB	contig_1:c46822-46418	LDFNMNDI_00045

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c47270-47022	LDFNMNDI_00046

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c47803-47687	LDFNMNDI_00047

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c48630-47905	LDFNMNDI_00048

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator MtlR	contig_1:c49937-48627	LDFNMNDI_00049

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide methionine sulfoxide reductase MsrA	contig_1:c51364-50573	LDFNMNDI_00050

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c52190-51555	LDFNMNDI_00051

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c53508-52456	LDFNMNDI_00052

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydropantoate 2-reductase	contig_1:c54459-53521	LDFNMNDI_00053

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c55560-54910	LDFNMNDI_00054

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c56169-55660	LDFNMNDI_00055

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GmuR	contig_1:c56916-56533	LDFNMNDI_00056

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c57772-57158	LDFNMNDI_00057

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:57916-58179	LDFNMNDI_00058

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:58176-58415	LDFNMNDI_00059

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose 1,6-diphosphate aldolase	contig_1:c59561-58587	LDFNMNDI_00060

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component	contig_1:c60035-59580	LDFNMNDI_00061

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIABC component	contig_1:c61508-60063	LDFNMNDI_00062

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose-6-phosphate kinase	contig_1:c62440-61505	LDFNMNDI_00063

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator MurR	contig_1:62608-63366	LDFNMNDI_00064

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c65060-63861	LDFNMNDI_00065

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c65992-65501	LDFNMNDI_00066

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-galactonate dehydratase	contig_1:c67164-66019	LDFNMNDI_00067

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactitol-specific EIIC component	contig_1:c68546-67179	LDFNMNDI_00068

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactitol-specific EIIB component	contig_1:c68849-68571	LDFNMNDI_00069

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactitol-specific EIIA component	contig_1:c69326-68868	LDFNMNDI_00070

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	contig_1:c69958-69338	LDFNMNDI_00071

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator ManR	contig_1:c72011-69969	LDFNMNDI_00072

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:72303-73475	LDFNMNDI_00073

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase ISLgar5	contig_1:c74860-73721	LDFNMNDI_00074

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c75414-74857	LDFNMNDI_00075

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c78579-75547	LDFNMNDI_00076

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c79836-78592	LDFNMNDI_00077

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c81625-79841	LDFNMNDI_00078

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c83868-82231	LDFNMNDI_00079

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c85245-83872	LDFNMNDI_00080

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c85500-85261	LDFNMNDI_00081

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c85646-85557	LDFNMNDI_00082

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c88361-85686	LDFNMNDI_00083

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c89467-88544	LDFNMNDI_00084

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c90993-89989	LDFNMNDI_00085

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c91364-91068	LDFNMNDI_00086

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c91650-91357	LDFNMNDI_00087

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c92348-91797	LDFNMNDI_00088

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c92821-92522	LDFNMNDI_00089

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c93156-92848	LDFNMNDI_00090

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:93310-94704	LDFNMNDI_00091

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c95542-94925	LDFNMNDI_00092

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c96856-95573	LDFNMNDI_00093

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA large subunit methyltransferase H	contig_1:c97538-97059	LDFNMNDI_00094

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine protease Do-like HtrA	contig_1:97966-99255	LDFNMNDI_00095

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c99966-99361	LDFNMNDI_00096

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative universal stress protein	contig_1:c100635-100171	LDFNMNDI_00097

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thioredoxin-like protein YtpP	contig_1:c100977-100657	LDFNMNDI_00098

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamyl aminopeptidase	contig_1:c102199-101120	LDFNMNDI_00099

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:102399-102749	LDFNMNDI_00100

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:102971-103918	LDFNMNDI_00101

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-Ala-Xaa dipeptidase	contig_1:c105392-103974	LDFNMNDI_00102

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ADP-dependent (S)-NAD(P)H-hydrate dehydratase	contig_1:105541-106386	LDFNMNDI_00103

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	1,4-dihydroxy-2-naphthoyl-CoA hydrolase	contig_1:106390-106830	LDFNMNDI_00104

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:106907-107074	LDFNMNDI_00105

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor RspR	contig_1:107209-107895	LDFNMNDI_00106

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c108978-108289	LDFNMNDI_00107

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c111082-108953	LDFNMNDI_00108

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c112467-111130	LDFNMNDI_00109

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase ISEfa10	contig_1:112736-113317	LDFNMNDI_00110

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase ISEfa10	contig_1:113359-114162	LDFNMNDI_00111

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c116132-114312	LDFNMNDI_00112

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L20	contig_1:c116730-116371	LDFNMNDI_00113

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L35	contig_1:c116983-116783	LDFNMNDI_00114

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Translation initiation factor IF-3	contig_1:c117579-117055	LDFNMNDI_00115

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:117899-118531	LDFNMNDI_00116

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cobalt/magnesium transport protein CorA	contig_1:c119438-118533	LDFNMNDI_00117

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyguanosine kinase	contig_1:c120176-119523	LDFNMNDI_00118

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Galactokinase	contig_1:120498-121442	LDFNMNDI_00119

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:121435-122412	LDFNMNDI_00120

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphomevalonate kinase	contig_1:122425-123510	LDFNMNDI_00121

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Isopentenyl-diphosphate delta-isomerase	contig_1:123507-124562	LDFNMNDI_00122

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	contig_1:c125486-124680	LDFNMNDI_00123

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 1	contig_1:c126345-125503	LDFNMNDI_00124

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydro-3-deoxygluconokinase	contig_1:c127368-126361	LDFNMNDI_00125

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	KHG/KDPG aldolase	contig_1:c128019-127375	LDFNMNDI_00126

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional repressor IclR	contig_1:c128877-128119	LDFNMNDI_00127

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactaldehyde reductase	contig_1:c129828-129004	LDFNMNDI_00128

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactaldehyde reductase	contig_1:c130154-129825	LDFNMNDI_00129

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-rhamnose mutarotase	contig_1:c130547-130236	LDFNMNDI_00130

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Rhamnulose-1-phosphate aldolase	contig_1:c131394-130549	LDFNMNDI_00131

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-rhamnose isomerase	contig_1:c132664-131408	LDFNMNDI_00132

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Rhamnulokinase	contig_1:c134121-132661	LDFNMNDI_00133

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arabinose operon regulatory protein	contig_1:134274-135143	LDFNMNDI_00134

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional activator RhaS	contig_1:c136159-135260	LDFNMNDI_00135

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inosose dehydratase	contig_1:c137147-136323	LDFNMNDI_00136

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	C4-dicarboxylate TRAP transporter large permease protein DctM	contig_1:c138453-137158	LDFNMNDI_00137

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sialic acid TRAP transporter small permease protein SiaQ	contig_1:c138948-138469	LDFNMNDI_00138

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Solute-binding protein	contig_1:c139982-138954	LDFNMNDI_00139

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Unsaturated rhamnogalacturonyl hydrolase YesR	contig_1:c141105-139999	LDFNMNDI_00140

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aldehyde-alcohol dehydrogenase	contig_1:c143932-141335	LDFNMNDI_00141

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c144618-144208	LDFNMNDI_00142

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Queuine tRNA-ribosyltransferase	contig_1:c145860-144715	LDFNMNDI_00143

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:146076-146774	LDFNMNDI_00144

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Calcium-transporting ATPase 1	contig_1:c149582-146943	LDFNMNDI_00145

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	contig_1:c151479-150448	LDFNMNDI_00146

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carnitine transport ATP-binding protein OpuCA	contig_1:151697-152872	LDFNMNDI_00147

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carnitine transport permease protein OpuCB	contig_1:152876-153517	LDFNMNDI_00148

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine betaine/carnitine/choline-binding protein OpuCC	contig_1:153514-154431	LDFNMNDI_00149

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine betaine/carnitine/choline transport system permease protein OpuCD	contig_1:154428-155105	LDFNMNDI_00150

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Potassium transporter KimA	contig_1:c157026-155203	LDFNMNDI_00151

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c160149-157444	LDFNMNDI_00152

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc-type alcohol dehydrogenase-like protein	contig_1:c161404-160457	LDFNMNDI_00153

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alternate 30S ribosomal protein S14	contig_1:161592-161861	LDFNMNDI_00154

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endoribonuclease EndoA	contig_1:c162395-162033	LDFNMNDI_00155

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alanine racemase	contig_1:c163527-162406	LDFNMNDI_00156

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holo-[acyl-carrier-protein] synthase	contig_1:c163893-163543	LDFNMNDI_00157

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent RNA helicase CshA	contig_1:c165534-164023	LDFNMNDI_00158

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	contig_1:c167268-165856	LDFNMNDI_00159

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanine--D-alanine ligase	contig_1:c168437-167361	LDFNMNDI_00160

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein kinase UbiB	contig_1:168633-170378	LDFNMNDI_00161

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c171028-170561	LDFNMNDI_00162

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c172385-171012	LDFNMNDI_00163

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative N-acetyltransferase	contig_1:c173196-172708	LDFNMNDI_00164

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c173820-173218	LDFNMNDI_00165

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uridine kinase	contig_1:c174911-174282	LDFNMNDI_00166

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative HAD-hydrolase YfnB	contig_1:c175690-174995	LDFNMNDI_00167

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal small subunit pseudouridine synthase A	contig_1:c176419-175703	LDFNMNDI_00168

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	General stress protein CTC	contig_1:176747-177355	LDFNMNDI_00169

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:177681-178004	LDFNMNDI_00170

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA damage-inducible protein F	contig_1:178186-179556	LDFNMNDI_00171

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c180986-179685	LDFNMNDI_00172

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Low affinity potassium transport system protein kup	contig_1:c183194-181203	LDFNMNDI_00173

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c183604-183338	LDFNMNDI_00174

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyribonucleotide nucleotidyltransferase	contig_1:c186241-184115	LDFNMNDI_00175

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S15	contig_1:c186698-186429	LDFNMNDI_00176

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide deformylase	contig_1:186948-187511	LDFNMNDI_00177

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c188214-187630	LDFNMNDI_00178

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c188781-188278	LDFNMNDI_00179

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c189152-188796	LDFNMNDI_00180

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription repressor NadR	contig_1:c189814-189293	LDFNMNDI_00181

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	contig_1:c190659-189817	LDFNMNDI_00182

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NAD-dependent protein deacetylase	contig_1:c191377-190652	LDFNMNDI_00183

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:191553-191849	LDFNMNDI_00184

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:192187-192378	LDFNMNDI_00185

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane-bound lytic murein transglycosylase F	contig_1:192417-194009	LDFNMNDI_00186

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine transport ATP-binding protein ArtM	contig_1:194022-194762	LDFNMNDI_00187

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-serine/D-alanine/glycine transporter	contig_1:194931-196280	LDFNMNDI_00188

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:c198046-196829	LDFNMNDI_00189

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Potassium channel	contig_1:c198892-198302	LDFNMNDI_00190

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Branched-chain amino acid transport system 2 carrier protein	contig_1:199039-200391	LDFNMNDI_00191

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c201025-200600	LDFNMNDI_00192

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c202097-201723	LDFNMNDI_00193

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Low molecular weight protein-tyrosine-phosphatase YfkJ	contig_1:c202696-202214	LDFNMNDI_00194

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c203327-202749	LDFNMNDI_00195

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holliday junction ATP-dependent DNA helicase RuvB	contig_1:c204357-203356	LDFNMNDI_00196

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holliday junction ATP-dependent DNA helicase RuvA	contig_1:c204972-204370	LDFNMNDI_00197

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide methionine sulfoxide reductase MsrB	contig_1:c205587-205141	LDFNMNDI_00198

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator TreR	contig_1:c206377-205664	LDFNMNDI_00199

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:206600-208588	LDFNMNDI_00200

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	dTTP/UTP pyrophosphatase	contig_1:c209233-208673	LDFNMNDI_00201

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA mismatch repair protein MutL	contig_1:c211362-209254	LDFNMNDI_00202

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA mismatch repair protein MutS	contig_1:c214025-211380	LDFNMNDI_00203

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YmcA	contig_1:c214383-214009	LDFNMNDI_00204

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2',3'-cyclic-nucleotide 2'-phosphodiesterase	contig_1:c215197-214400	LDFNMNDI_00205

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase	contig_1:c216381-215608	LDFNMNDI_00206

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c217036-216401	LDFNMNDI_00207

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nitrite transporter NirC	contig_1:c217898-217065	LDFNMNDI_00208

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S4	contig_1:218178-218789	LDFNMNDI_00209

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Biotin transporter BioY2	contig_1:218928-219467	LDFNMNDI_00210

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Queuosine precursor transporter QueT	contig_1:c220051-219542	LDFNMNDI_00211

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-beta-hydroxycholanate 3-dehydrogenase (NAD(+)) 2	contig_1:c221146-220385	LDFNMNDI_00212

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c221364-221143	LDFNMNDI_00213

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c222904-221384	LDFNMNDI_00214

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YohK	contig_1:c223671-222970	LDFNMNDI_00215

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holin-like protein CidA	contig_1:c224074-223664	LDFNMNDI_00216

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol facilitator-aquaporin gla	contig_1:224400-225134	LDFNMNDI_00217

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c226524-225226	LDFNMNDI_00218

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c228025-227057	LDFNMNDI_00219

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c230194-228167	LDFNMNDI_00220

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c230978-230250	LDFNMNDI_00221

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c232387-231488	LDFNMNDI_00222

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c232753-232397	LDFNMNDI_00223

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c233398-232817	LDFNMNDI_00224

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:233628-233924	LDFNMNDI_00225

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Petrobactin-binding protein YclQ	contig_1:c235017-234064	LDFNMNDI_00226

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Petrobactin import ATP-binding protein YclP	contig_1:c235795-235040	LDFNMNDI_00227

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Petrobactin import system permease protein YclO	contig_1:c236748-235792	LDFNMNDI_00228

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Petrobactin import system permease protein YclN	contig_1:c237691-236741	LDFNMNDI_00229

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YueI	contig_1:237841-238293	LDFNMNDI_00230

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione biosynthesis bifunctional protein GshAB	contig_1:c240648-238381	LDFNMNDI_00231

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Signal recognition particle receptor FtsY	contig_1:c241833-240835	LDFNMNDI_00232

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sugar phosphatase YidA	contig_1:c242654-241845	LDFNMNDI_00233

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:c246244-242663	LDFNMNDI_00234

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease 3	contig_1:c246950-246264	LDFNMNDI_00235

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein A	contig_1:c247853-247485	LDFNMNDI_00236

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c250281-248500	LDFNMNDI_00237

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c251222-250308	LDFNMNDI_00238

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione transport system permease protein GsiC	contig_1:c252211-251249	LDFNMNDI_00239

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppF	contig_1:c253155-252211	LDFNMNDI_00240

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppD	contig_1:c254160-253156	LDFNMNDI_00241

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acyl carrier protein	contig_1:c254670-254428	LDFNMNDI_00242

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate acyltransferase	contig_1:c255792-254791	LDFNMNDI_00243

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent DNA helicase RecG	contig_1:c257877-255841	LDFNMNDI_00244

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c259677-257995	LDFNMNDI_00245

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c260091-259729	LDFNMNDI_00246

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L28	contig_1:260361-260549	LDFNMNDI_00247

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:260788-263457	LDFNMNDI_00248

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA pseudouridine synthase A	contig_1:c264530-263784	LDFNMNDI_00249

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Energy-coupling factor transporter transmembrane protein EcfT	contig_1:c265531-264734	LDFNMNDI_00250

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Energy-coupling factor transporter ATP-binding protein EcfA2	contig_1:c266390-265521	LDFNMNDI_00251

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Energy-coupling factor transporter ATP-binding protein EcfA1	contig_1:c267205-266366	LDFNMNDI_00252

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L17	contig_1:c267857-267477	LDFNMNDI_00253

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-directed RNA polymerase subunit alpha	contig_1:c268823-267885	LDFNMNDI_00254

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S11	contig_1:c269292-268903	LDFNMNDI_00255

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S13	contig_1:c269685-269320	LDFNMNDI_00256

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L36	contig_1:c269819-269703	LDFNMNDI_00257

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Translation initiation factor IF-1	contig_1:c270070-269852	LDFNMNDI_00258

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenylate kinase	contig_1:c270908-270261	LDFNMNDI_00259

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein translocase subunit SecY	contig_1:c272265-270970	LDFNMNDI_00260

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L15	contig_1:c272705-272265	LDFNMNDI_00261

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L30	contig_1:c272927-272748	LDFNMNDI_00262

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S5	contig_1:c273442-272942	LDFNMNDI_00263

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L18	contig_1:c273819-273463	LDFNMNDI_00264

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L6	contig_1:c274516-273980	LDFNMNDI_00265

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S8	contig_1:c274946-274548	LDFNMNDI_00266

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S14 type Z	contig_1:c275167-274982	LDFNMNDI_00267

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L5	contig_1:c275725-275186	LDFNMNDI_00268

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L24	contig_1:c276061-275753	LDFNMNDI_00269

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L14	contig_1:c276466-276098	LDFNMNDI_00270

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S17	contig_1:c276790-276524	LDFNMNDI_00271

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L29	contig_1:c277003-276815	LDFNMNDI_00272

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L16	contig_1:c277427-276993	LDFNMNDI_00273

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S3	contig_1:c278086-277430	LDFNMNDI_00274

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L22	contig_1:c278447-278100	LDFNMNDI_00275

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S19	contig_1:c278748-278470	LDFNMNDI_00276

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L2	contig_1:c279624-278791	LDFNMNDI_00277

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L23	contig_1:c279953-279663	LDFNMNDI_00278

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L4	contig_1:c280576-279953	LDFNMNDI_00279

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L3	contig_1:c281233-280604	LDFNMNDI_00280

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S10	contig_1:c281572-281264	LDFNMNDI_00281

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor Tu	contig_1:c283164-281977	LDFNMNDI_00282

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor G	contig_1:c285423-283336	LDFNMNDI_00283

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S7	contig_1:c285987-285517	LDFNMNDI_00284

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S12	contig_1:c286484-286071	LDFNMNDI_00285

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribose-5-phosphate isomerase A	contig_1:286803-287486	LDFNMNDI_00286

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-invertase hin	contig_1:287619-288200	LDFNMNDI_00287

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	contig_1:288371-289057	LDFNMNDI_00288

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS982 family transposase ISEfm1	contig_1:c290120-289212	LDFNMNDI_00289

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:290659-291525	LDFNMNDI_00290

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Purine nucleoside phosphorylase DeoD-type	contig_1:c292616-291909	LDFNMNDI_00291

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Purine nucleoside phosphorylase 1	contig_1:c293451-292633	LDFNMNDI_00292

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphopentomutase	contig_1:c294642-293476	LDFNMNDI_00293

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c295697-294741	LDFNMNDI_00294

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c296830-295697	LDFNMNDI_00295

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Galactose/methyl galactoside import ATP-binding protein MglA	contig_1:c298385-296823	LDFNMNDI_00296

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane lipoprotein TmpC	contig_1:c299679-298597	LDFNMNDI_00297

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cytidine deaminase	contig_1:c300143-299745	LDFNMNDI_00298

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyribose-phosphate aldolase	contig_1:c300824-300162	LDFNMNDI_00299

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyrimidine-nucleoside phosphorylase	contig_1:c302172-300871	LDFNMNDI_00300

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator DegA	contig_1:c303329-302313	LDFNMNDI_00301

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase C	contig_1:c304243-303638	LDFNMNDI_00302

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pantothenate kinase	contig_1:304439-305362	LDFNMNDI_00303

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GMP synthase [glutamine-hydrolyzing]	contig_1:305421-306986	LDFNMNDI_00304

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c307136-307014	LDFNMNDI_00305

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS1062	contig_1:c308501-307542	LDFNMNDI_00306

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS982 family transposase ISEfm1	contig_1:c309497-308583	LDFNMNDI_00307

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:309842-310270	LDFNMNDI_00308

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA pyrophosphohydrolase	contig_1:310369-310845	LDFNMNDI_00309

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c311544-310948	LDFNMNDI_00310

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c312168-311587	LDFNMNDI_00311

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c312642-312250	LDFNMNDI_00312

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppF	contig_1:c313737-312808	LDFNMNDI_00313

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppD	contig_1:c314815-313727	LDFNMNDI_00314

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport system permease protein OppC	contig_1:c315761-314826	LDFNMNDI_00315

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c317244-315763	LDFNMNDI_00316

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide-binding protein AmiA	contig_1:c319311-317326	LDFNMNDI_00317

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:319935-320438	LDFNMNDI_00318

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c321495-321358	LDFNMNDI_00319

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Potassium channel	contig_1:c322168-321590	LDFNMNDI_00320

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:322337-322534	LDFNMNDI_00321

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc transporter ZupT	contig_1:c323454-322636	LDFNMNDI_00322

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate oxidase	contig_1:323619-325349	LDFNMNDI_00323

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c326301-325780	LDFNMNDI_00324

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein YbiT	contig_1:326550-328172	LDFNMNDI_00325

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DegV domain-containing protein	contig_1:c329164-328301	LDFNMNDI_00326

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenylosuccinate synthetase	contig_1:c331118-329826	LDFNMNDI_00327

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:331519-332736	LDFNMNDI_00328

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Replicative DNA helicase	contig_1:c334766-333399	LDFNMNDI_00329

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L9	contig_1:c335493-335041	LDFNMNDI_00330

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cyclic-di-AMP phosphodiesterase GdpP	contig_1:c337472-335499	LDFNMNDI_00331

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S18	contig_1:c337851-337615	LDFNMNDI_00332

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Single-stranded DNA-binding protein	contig_1:c338389-337877	LDFNMNDI_00333

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S6	contig_1:c338739-338440	LDFNMNDI_00334

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA gyrase subunit A	contig_1:c341446-338975	LDFNMNDI_00335

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA gyrase subunit B	contig_1:c343412-341466	LDFNMNDI_00336

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA replication and repair protein RecF	contig_1:c344533-343409	LDFNMNDI_00337

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c344762-344520	LDFNMNDI_00338

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta sliding clamp	contig_1:c346120-344990	LDFNMNDI_00339

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosomal replication initiator protein DnaA	contig_1:c347652-346318	LDFNMNDI_00340

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L34	contig_1:348175-348309	LDFNMNDI_00341

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease P protein component	contig_1:348427-348783	LDFNMNDI_00342

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane protein insertase MisCA	contig_1:348780-349598	LDFNMNDI_00343

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:349616-350374	LDFNMNDI_00344

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c350882-350544	LDFNMNDI_00345

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA modification GTPase MnmE	contig_1:351227-352624	LDFNMNDI_00346

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	contig_1:352641-354542	LDFNMNDI_00347

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase G	contig_1:354776-355489	LDFNMNDI_00348

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sporulation initiation inhibitor protein Soj	contig_1:355501-356268	LDFNMNDI_00349

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Stage 0 sporulation protein J	contig_1:356255-357145	LDFNMNDI_00350

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:357166-357357	LDFNMNDI_00351

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome-binding ATPase YchF	contig_1:357366-358466	LDFNMNDI_00352

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:358556-359251	LDFNMNDI_00353

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inosine-5'-monophosphate dehydrogenase	contig_1:359927-361411	LDFNMNDI_00354

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine--tRNA ligase	contig_1:c363218-361947	LDFNMNDI_00355

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase RcsC	contig_1:c364720-363512	LDFNMNDI_00356

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein SrrA	contig_1:c365396-364707	LDFNMNDI_00357

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator CtsR	contig_1:372024-372491	LDFNMNDI_00370

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Negative regulator of genetic competence ClpC/MecB	contig_1:372498-374984	LDFNMNDI_00371

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	23S rRNA 5-hydroxycytidine synthase	contig_1:375205-376128	LDFNMNDI_00372

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:376137-377387	LDFNMNDI_00373

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione reductase	contig_1:377521-378867	LDFNMNDI_00374

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c380448-378961	LDFNMNDI_00375

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:381131-382555	LDFNMNDI_00376

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:382654-382962	LDFNMNDI_00377

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	1,4-dihydroxy-2-naphthoate octaprenyltransferase	contig_1:c384191-383238	LDFNMNDI_00378

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	FAD:protein FMN transferase	contig_1:c385307-384204	LDFNMNDI_00379

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c386353-385397	LDFNMNDI_00380

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nitric oxide reductase FlRd-NAD(+) reductase	contig_1:386633-388567	LDFNMNDI_00381

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:389022-389438	LDFNMNDI_00382

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:389452-390018	LDFNMNDI_00383

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Heptaprenyl diphosphate synthase component 2	contig_1:390041-391027	LDFNMNDI_00384

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:391495-392937	LDFNMNDI_00385

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c393726-392953	LDFNMNDI_00386

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:394106-394345	LDFNMNDI_00387

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:394562-394750	LDFNMNDI_00388

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional ligase/repressor BirA	contig_1:c396176-395208	LDFNMNDI_00389

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC transporter ATP-binding protein YtrE	contig_1:c397139-396333	LDFNMNDI_00390

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c398041-397136	LDFNMNDI_00391

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c398913-398059	LDFNMNDI_00392

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-directed RNA polymerase subunit beta	contig_1:399754-403371	LDFNMNDI_00393

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-directed RNA polymerase subunit beta'	contig_1:403450-407103	LDFNMNDI_00394

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c408478-407324	LDFNMNDI_00395

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide methionine sulfoxide reductase MsrA	contig_1:408767-409294	LDFNMNDI_00396

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Type 4 prepilin-like proteins leader peptide-processing enzyme	contig_1:c410052-409366	LDFNMNDI_00397

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xylulose kinase	contig_1:410132-411670	LDFNMNDI_00398

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA protection during starvation protein	contig_1:411790-412257	LDFNMNDI_00399

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L13	contig_1:412525-412968	LDFNMNDI_00400

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S9	contig_1:412984-413376	LDFNMNDI_00401

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c413583-413383	LDFNMNDI_00402

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c413890-413573	LDFNMNDI_00403

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:413997-414227	LDFNMNDI_00404

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:414290-415906	LDFNMNDI_00405

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator ManR	contig_1:416118-418040	LDFNMNDI_00406

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component	contig_1:418041-418487	LDFNMNDI_00407

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIBCA component	contig_1:418503-418817	LDFNMNDI_00408

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:418843-422424	LDFNMNDI_00409

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA mismatch repair protein MutS	contig_1:422540-424189	LDFNMNDI_00410

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein YadG	contig_1:424505-425440	LDFNMNDI_00411

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane transport permease YadH	contig_1:425433-426203	LDFNMNDI_00412

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative tRNA-dihydrouridine synthase	contig_1:426493-427476	LDFNMNDI_00413

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc-type alcohol dehydrogenase-like protein	contig_1:427801-428838	LDFNMNDI_00414

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c429247-428924	LDFNMNDI_00415

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YgaZ	contig_1:c429941-429234	LDFNMNDI_00416

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:430401-431288	LDFNMNDI_00417

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Type VII secretion system extracellular protein A	contig_1:431848-432141	LDFNMNDI_00418

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:432522-435920	LDFNMNDI_00419

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:435917-436426	LDFNMNDI_00420

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:436428-436706	LDFNMNDI_00421

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:436703-437872	LDFNMNDI_00422

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:437853-439514	LDFNMNDI_00423

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Type VII secretion system protein EssC	contig_1:439662-441314	LDFNMNDI_00424

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:441277-441735	LDFNMNDI_00425

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:441834-442316	LDFNMNDI_00426

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative HTH-type transcriptional regulator YwnA	contig_1:c442925-442458	LDFNMNDI_00427

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Quinone oxidoreductase 2	contig_1:443048-443899	LDFNMNDI_00428

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system glucose-specific EIICBA component	contig_1:c446193-444235	LDFNMNDI_00429

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Levansucrase and sucrase synthesis operon antiterminator	contig_1:c447062-446190	LDFNMNDI_00430

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:447416-448684	LDFNMNDI_00431

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c451791-448978	LDFNMNDI_00432

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c452063-451857	LDFNMNDI_00433

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator SlyA	contig_1:452254-452718	LDFNMNDI_00434

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative NAD(P)H nitroreductase YodC	contig_1:452702-453331	LDFNMNDI_00435

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC-F type ribosomal protection protein Msr(C)	contig_1:453685-455163	LDFNMNDI_00436

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:455210-455656	LDFNMNDI_00437

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c456372-455857	LDFNMNDI_00438

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug efflux protein YfmO	contig_1:456489-457691	LDFNMNDI_00439

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:458063-458383	LDFNMNDI_00440

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c458982-458638	LDFNMNDI_00441

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Gamma-glutamyl phosphate reductase	contig_1:c460305-459058	LDFNMNDI_00442

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamate 5-kinase 1	contig_1:c461108-460302	LDFNMNDI_00443

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyuridine 5'-triphosphate nucleotidohydrolase	contig_1:461338-461865	LDFNMNDI_00444

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA repair protein RadA	contig_1:461928-463298	LDFNMNDI_00445

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative PIN and TRAM-domain containing protein YacL	contig_1:463332-464489	LDFNMNDI_00446

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamate--tRNA ligase	contig_1:464659-466119	LDFNMNDI_00447

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine acetyltransferase	contig_1:466442-466978	LDFNMNDI_00448

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine--tRNA ligase	contig_1:466975-468387	LDFNMNDI_00449

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mini-ribonuclease 3	contig_1:468384-468779	LDFNMNDI_00450

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative TrmH family tRNA/rRNA methyltransferase	contig_1:468772-469632	LDFNMNDI_00451

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:469636-470166	LDFNMNDI_00452

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA polymerase sigma factor SigI	contig_1:470243-470659	LDFNMNDI_00453

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein Veg	contig_1:470936-471181	LDFNMNDI_00454

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein ElaA	contig_1:471274-471720	LDFNMNDI_00455

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Large-conductance mechanosensitive channel	contig_1:c472243-471782	LDFNMNDI_00456

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:472494-473762	LDFNMNDI_00457

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:473755-475041	LDFNMNDI_00458

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:475572-476456	LDFNMNDI_00459

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	contig_1:476665-477243	LDFNMNDI_00460

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative competence-damage inducible protein	contig_1:477414-478655	LDFNMNDI_00461

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein RecA	contig_1:478764-479813	LDFNMNDI_00462

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease Y	contig_1:480233-481789	LDFNMNDI_00463

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyrroline-5-carboxylate reductase	contig_1:c482674-481868	LDFNMNDI_00464

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphatidylglycerol lysyltransferase	contig_1:482815-485388	LDFNMNDI_00465

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	contig_1:485548-486393	LDFNMNDI_00466

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	High-affinity zinc uptake system binding-protein ZnuA	contig_1:486640-487578	LDFNMNDI_00467

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	High-affinity zinc uptake system ATP-binding protein ZnuC	contig_1:487600-488280	LDFNMNDI_00468

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	High-affinity zinc uptake system membrane protein ZnuB	contig_1:488253-489077	LDFNMNDI_00469

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pur operon repressor	contig_1:489244-490062	LDFNMNDI_00470

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional protein GlmU	contig_1:490443-491816	LDFNMNDI_00471

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribose-phosphate pyrophosphokinase	contig_1:491910-492881	LDFNMNDI_00472

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiamine transporter ThiT	contig_1:493055-493624	LDFNMNDI_00473

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c494479-493706	LDFNMNDI_00474

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:494736-496436	LDFNMNDI_00475

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:496406-496624	LDFNMNDI_00476

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:496644-497534	LDFNMNDI_00477

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:497531-497836	LDFNMNDI_00478

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:c499308-498091	LDFNMNDI_00479

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Guanylate kinase	contig_1:499783-500397	LDFNMNDI_00480

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-directed RNA polymerase subunit omega	contig_1:500402-500707	LDFNMNDI_00481

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Primosomal protein N'	contig_1:500960-503368	LDFNMNDI_00482

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide deformylase 1	contig_1:503383-503874	LDFNMNDI_00483

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionyl-tRNA formyltransferase	contig_1:503867-504805	LDFNMNDI_00484

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase B	contig_1:504805-506163	LDFNMNDI_00485

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine phosphatase stp	contig_1:506176-506916	LDFNMNDI_00486

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine-protein kinase PrkC	contig_1:506913-508982	LDFNMNDI_00487

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Small ribosomal subunit biogenesis GTPase RsgA	contig_1:509179-510078	LDFNMNDI_00488

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribulose-phosphate 3-epimerase	contig_1:510091-510741	LDFNMNDI_00489

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiamine pyrophosphokinase	contig_1:510742-511380	LDFNMNDI_00490

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell shape-determining protein MreC	contig_1:511536-512390	LDFNMNDI_00491

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:512394-512903	LDFNMNDI_00492

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:513158-514726	LDFNMNDI_00493

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligoendopeptidase F, plasmid	contig_1:c516594-514795	LDFNMNDI_00494

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:516716-517222	LDFNMNDI_00495

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative transcriptional regulatory protein	contig_1:517301-518023	LDFNMNDI_00496

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c519502-518105	LDFNMNDI_00497

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-lactate dehydrogenase	contig_1:c520646-519672	LDFNMNDI_00498

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptidyl-tRNA hydrolase	contig_1:520999-521559	LDFNMNDI_00499

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription-repair-coupling factor	contig_1:521576-525097	LDFNMNDI_00500

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipid II flippase MurJ	contig_1:525112-526707	LDFNMNDI_00501

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:526718-526987	LDFNMNDI_00502

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein FtsL	contig_1:527055-527480	LDFNMNDI_00503

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyribonucleotide nucleotidyltransferase	contig_1:527526-527996	LDFNMNDI_00504

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA(Ile)-lysidine synthase	contig_1:528107-529561	LDFNMNDI_00505

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Hypoxanthine-guanine phosphoribosyltransferase	contig_1:529561-530106	LDFNMNDI_00506

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent zinc metalloprotease FtsH	contig_1:530196-532307	LDFNMNDI_00507

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	33 kDa chaperonin	contig_1:532524-533411	LDFNMNDI_00508

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA-dihydrouridine synthase B	contig_1:533412-534416	LDFNMNDI_00509

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lysine--tRNA ligase	contig_1:534527-536023	LDFNMNDI_00510

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	S-adenosylmethionine synthase	contig_1:544221-545414	LDFNMNDI_00540

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug resistance protein 3	contig_1:545545-547017	LDFNMNDI_00541

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:547100-547888	LDFNMNDI_00542

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c548623-547958	LDFNMNDI_00543

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:548738-550450	LDFNMNDI_00544

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:550453-552222	LDFNMNDI_00545

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase H	contig_1:c552991-552425	LDFNMNDI_00546

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c553947-552991	LDFNMNDI_00547

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c554603-553947	LDFNMNDI_00548

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Muramidase-2	contig_1:554973-556979	LDFNMNDI_00549

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Leucine--tRNA ligase	contig_1:557401-559815	LDFNMNDI_00550

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:559996-561066	LDFNMNDI_00551

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:561291-561605	LDFNMNDI_00552

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative licABCH operon regulator	contig_1:561626-563605	LDFNMNDI_00553

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan-specific phosphotransferase enzyme IIA component	contig_1:563618-563944	LDFNMNDI_00554

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:563960-564478	LDFNMNDI_00555

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan permease IIC component	contig_1:564478-565833	LDFNMNDI_00556

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase	contig_1:c568066-566561	LDFNMNDI_00557

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c568748-568158	LDFNMNDI_00558

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipid II flippase MurJ	contig_1:568927-570573	LDFNMNDI_00559

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal large subunit pseudouridine synthase B	contig_1:570622-571341	LDFNMNDI_00560

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative multiple-sugar transport system permease YteP	contig_1:571700-572647	LDFNMNDI_00561

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraQ	contig_1:572659-573579	LDFNMNDI_00562

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:573616-575076	LDFNMNDI_00563

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:575332-575946	LDFNMNDI_00564

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:575939-577663	LDFNMNDI_00565

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional activator RhaR	contig_1:577666-579111	LDFNMNDI_00566

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c581405-579252	LDFNMNDI_00567

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arabinose metabolism transcriptional repressor	contig_1:c582453-581407	LDFNMNDI_00568

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:582603-583892	LDFNMNDI_00569

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mannosylglycerate hydrolase	contig_1:583905-586592	LDFNMNDI_00570

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative fructokinase	contig_1:586593-587450	LDFNMNDI_00571

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal large subunit pseudouridine synthase D	contig_1:c588374-587517	LDFNMNDI_00572

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Penicillin-binding protein 1F	contig_1:588584-590755	LDFNMNDI_00573

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:590823-591164	LDFNMNDI_00574

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative multidrug export ATP-binding/permease protein	contig_1:c593193-591439	LDFNMNDI_00575

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c594040-593204	LDFNMNDI_00576

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Rhamnogalacturonan acetylesterase RhgT	contig_1:c594725-594042	LDFNMNDI_00577

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uronate isomerase	contig_1:c596278-594884	LDFNMNDI_00578

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Altronate dehydratase	contig_1:c597817-596318	LDFNMNDI_00579

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Altronate oxidoreductase	contig_1:c599231-597810	LDFNMNDI_00580

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional repressor ExuR	contig_1:c600283-599291	LDFNMNDI_00581

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:600514-601005	LDFNMNDI_00582

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator YesS	contig_1:600966-602663	LDFNMNDI_00583

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraQ	contig_1:c603889-603017	LDFNMNDI_00584

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative multiple-sugar transport system permease YteP	contig_1:604187-605161	LDFNMNDI_00585

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:605183-605875	LDFNMNDI_00586

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:605841-606167	LDFNMNDI_00587

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoprotein LipO	contig_1:606164-607015	LDFNMNDI_00588

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:607022-607342	LDFNMNDI_00589

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Unsaturated rhamnogalacturonyl hydrolase YteR	contig_1:607416-608519	LDFNMNDI_00590

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:608522-609859	LDFNMNDI_00591

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:609816-610724	LDFNMNDI_00592

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pectinesterase A	contig_1:610721-611644	LDFNMNDI_00593

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:611641-612051	LDFNMNDI_00594

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-xylosidase	contig_1:612055-613623	LDFNMNDI_00595

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative symporter YjmB	contig_1:613863-615281	LDFNMNDI_00596

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:615271-616602	LDFNMNDI_00597

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphatase YwpJ	contig_1:622382-623218	LDFNMNDI_00601

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:623416-624636	LDFNMNDI_00602

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:624633-627353	LDFNMNDI_00603

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3'-5' exoribonuclease YhaM	contig_1:627337-628281	LDFNMNDI_00604

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Foldase protein PrsA	contig_1:c629359-628349	LDFNMNDI_00605

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c629884-629537	LDFNMNDI_00606

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein hit	contig_1:c630311-629877	LDFNMNDI_00607

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC-type transporter ATP-binding protein EcsA	contig_1:630449-631186	LDFNMNDI_00608

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:631179-632390	LDFNMNDI_00609

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiamine kinase	contig_1:632595-633377	LDFNMNDI_00610

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA (guanine-N(7)-)-methyltransferase	contig_1:633446-634108	LDFNMNDI_00611

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenine deaminase	contig_1:c635949-634222	LDFNMNDI_00612

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ComG operon protein 1	contig_1:636081-637010	LDFNMNDI_00613

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:636967-638016	LDFNMNDI_00614

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ComG operon protein 3	contig_1:638013-638291	LDFNMNDI_00615

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:638242-638736	LDFNMNDI_00616

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:638708-639055	LDFNMNDI_00617

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:639018-639443	LDFNMNDI_00618

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:639415-639774	LDFNMNDI_00619

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Release factor glutamine methyltransferase	contig_1:639946-640953	LDFNMNDI_00620

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetate kinase	contig_1:640978-642162	LDFNMNDI_00621

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative universal stress protein	contig_1:c642886-642416	LDFNMNDI_00622

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c643243-642959	LDFNMNDI_00623

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative AAA domain-containing protein	contig_1:c644873-643587	LDFNMNDI_00624

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative 3-methyladenine DNA glycosylase	contig_1:645011-645682	LDFNMNDI_00625

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:645648-646136	LDFNMNDI_00626

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal protein L11 methyltransferase	contig_1:646149-647096	LDFNMNDI_00627

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase E	contig_1:647097-647861	LDFNMNDI_00628

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTP pyrophosphokinase	contig_1:647946-650306	LDFNMNDI_00629

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-aminoacyl-tRNA deacylase	contig_1:650318-650764	LDFNMNDI_00630

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fatty-acid peroxygenase	contig_1:650935-652194	LDFNMNDI_00631

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aldo-keto reductase IolS	contig_1:c653229-652282	LDFNMNDI_00632

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Histidine--tRNA ligase	contig_1:653625-654917	LDFNMNDI_00633

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartate--tRNA ligase	contig_1:654931-656700	LDFNMNDI_00634

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:656809-657684	LDFNMNDI_00635

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	O-acetyltransferase OatA	contig_1:657951-659834	LDFNMNDI_00636

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c660187-659903	LDFNMNDI_00637

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA1(Val) (adenine(37)-N6)-methyltransferase	contig_1:c660911-660177	LDFNMNDI_00638

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	1-acyl-sn-glycerol-3-phosphate acyltransferase	contig_1:661040-661663	LDFNMNDI_00639

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nuclease SbcCD subunit D	contig_1:661851-662972	LDFNMNDI_00640

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:662979-666107	LDFNMNDI_00641

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA polymerase-associated protein RapA	contig_1:666126-669320	LDFNMNDI_00642

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative HAD-hydrolase YfnB	contig_1:c670173-669466	LDFNMNDI_00643

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein Spx	contig_1:670938-671336	LDFNMNDI_00644

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adapter protein MecA	contig_1:671667-672320	LDFNMNDI_00645

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:672418-673416	LDFNMNDI_00646

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligoendopeptidase F, plasmid	contig_1:673595-675403	LDFNMNDI_00647

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c676152-675475	LDFNMNDI_00648

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative triphosphatase YjbK	contig_1:c676845-676270	LDFNMNDI_00649

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTP pyrophosphokinase YjbM	contig_1:676976-677683	LDFNMNDI_00650

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NAD kinase 1	contig_1:677658-678455	LDFNMNDI_00651

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:678457-679356	LDFNMNDI_00652

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Magnesium transporter MgtE	contig_1:679374-680735	LDFNMNDI_00653

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Copper homeostasis protein CutC	contig_1:c681436-680795	LDFNMNDI_00654

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	23S rRNA (guanine(745)-N(1))-methyltransferase	contig_1:681545-682411	LDFNMNDI_00655

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA (cytidine(34)-2'-O)-methyltransferase	contig_1:682632-683135	LDFNMNDI_00656

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoserine phosphatase 1	contig_1:683184-683843	LDFNMNDI_00657

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent RecD-like DNA helicase	contig_1:683863-686433	LDFNMNDI_00658

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative lipid kinase YtlR	contig_1:c687627-686665	LDFNMNDI_00659

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Queuosine precursor transporter QueT	contig_1:688227-688730	LDFNMNDI_00660

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c689430-688786	LDFNMNDI_00661

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L33 3	contig_1:689593-689745	LDFNMNDI_00662

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein translocase subunit SecE	contig_1:689766-689936	LDFNMNDI_00663

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription termination/antitermination protein NusG	contig_1:690037-690582	LDFNMNDI_00664

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:690666-691553	LDFNMNDI_00665

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactate 2-monooxygenase	contig_1:691645-692745	LDFNMNDI_00666

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-serine dehydratase, alpha chain	contig_1:c693710-692838	LDFNMNDI_00667

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-serine dehydratase, beta chain	contig_1:c694391-693723	LDFNMNDI_00668

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L11	contig_1:694735-695157	LDFNMNDI_00669

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L1	contig_1:695261-695950	LDFNMNDI_00670

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L10	contig_1:696276-696779	LDFNMNDI_00671

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L7/L12	contig_1:696832-697200	LDFNMNDI_00672

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:697307-697996	LDFNMNDI_00673

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative transporter	contig_1:698078-699268	LDFNMNDI_00674

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein YbiT	contig_1:c700856-699324	LDFNMNDI_00675

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucosamine-6-phosphate deaminase	contig_1:701090-701791	LDFNMNDI_00676

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein SapB	contig_1:702050-702763	LDFNMNDI_00677

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:702942-704081	LDFNMNDI_00678

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:704462-706198	LDFNMNDI_00679

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:706185-707018	LDFNMNDI_00680

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-galactosidase	contig_1:c708932-707145	LDFNMNDI_00681

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Unsaturated chondroitin disaccharide hydrolase	contig_1:c710099-708948	LDFNMNDI_00682

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor NagR	contig_1:c710931-710224	LDFNMNDI_00683

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator ManR	contig_1:711210-712694	LDFNMNDI_00684

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:712684-713091	LDFNMNDI_00685

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIBCA component	contig_1:713088-713402	LDFNMNDI_00686

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIBCA component	contig_1:713418-713870	LDFNMNDI_00687

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIBCA component	contig_1:713887-714207	LDFNMNDI_00688

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIB'BC component	contig_1:714227-715321	LDFNMNDI_00689

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-allulose-6-phosphate 3-epimerase	contig_1:715378-716067	LDFNMNDI_00690

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIAB component	contig_1:716280-717206	LDFNMNDI_00691

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system sorbose-specific EIIC component	contig_1:717230-718027	LDFNMNDI_00692

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIID component	contig_1:718014-718820	LDFNMNDI_00693

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Hyaluronate lyase	contig_1:718956-720443	LDFNMNDI_00694

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xanthan lyase	contig_1:720410-721372	LDFNMNDI_00695

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonucleoside-diphosphate reductase 2 subunit beta	contig_1:c722384-721419	LDFNMNDI_00696

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonucleoside-diphosphate reductase subunit alpha 2	contig_1:c724593-722434	LDFNMNDI_00697

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutaredoxin-like protein NrdH	contig_1:c724976-724752	LDFNMNDI_00698

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:725378-725851	LDFNMNDI_00699

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fe(2+) transporter FeoB	contig_1:725848-727980	LDFNMNDI_00700

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:727982-728116	LDFNMNDI_00701

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:728210-728854	LDFNMNDI_00702

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine betaine transport ATP-binding protein OpuAA	contig_1:729042-730235	LDFNMNDI_00703

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:730228-731955	LDFNMNDI_00704

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:732583-733149	LDFNMNDI_00706

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DegV domain-containing protein	contig_1:733139-733999	LDFNMNDI_00707

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein WalR	contig_1:734189-734893	LDFNMNDI_00708

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase WalK	contig_1:734898-736733	LDFNMNDI_00709

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:736730-738046	LDFNMNDI_00710

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Two-component system WalR/WalK regulatory protein YycI	contig_1:738047-738916	LDFNMNDI_00711

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative metallo-hydrolase YycJ	contig_1:738971-739780	LDFNMNDI_00712

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c740510-739881	LDFNMNDI_00713

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan permease IIC component	contig_1:740679-741977	LDFNMNDI_00714

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane-embedded CAAX protease MroQ	contig_1:c742716-742054	LDFNMNDI_00715

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	10 kDa chaperonin	contig_1:742941-743225	LDFNMNDI_00716

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	60 kDa chaperonin	contig_1:743277-744902	LDFNMNDI_00717

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerC	contig_1:c746130-744991	LDFNMNDI_00718

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c746540-746235	LDFNMNDI_00719

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c746827-746627	LDFNMNDI_00720

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	LexA repressor	contig_1:c747687-746848	LDFNMNDI_00721

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:747852-748100	LDFNMNDI_00722

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:748143-748898	LDFNMNDI_00723

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:748858-749157	LDFNMNDI_00724

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:749157-749327	LDFNMNDI_00725

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c749865-749386	LDFNMNDI_00726

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:749910-750020	LDFNMNDI_00727

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:750017-750241	LDFNMNDI_00728

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:750252-750608	LDFNMNDI_00729

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:750595-750789	LDFNMNDI_00730

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:750792-751391	LDFNMNDI_00731

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c751725-751375	LDFNMNDI_00732

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:751779-752801	LDFNMNDI_00733

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:752761-753579	LDFNMNDI_00734

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:753597-754379	LDFNMNDI_00735

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:754379-755227	LDFNMNDI_00736

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:755224-755466	LDFNMNDI_00737

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:755463-755651	LDFNMNDI_00738

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:755609-756064	LDFNMNDI_00739

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:756066-756641	LDFNMNDI_00740

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:756638-756826	LDFNMNDI_00741

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:756834-757025	LDFNMNDI_00742

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c757545-757132	LDFNMNDI_00743

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:757905-758381	LDFNMNDI_00744

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:758624-759037	LDFNMNDI_00745

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c759209-759030	LDFNMNDI_00746

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:759570-759956	LDFNMNDI_00747

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:759937-760323	LDFNMNDI_00748

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:760320-760700	LDFNMNDI_00749

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:760812-761264	LDFNMNDI_00750

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:761261-762988	LDFNMNDI_00751

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:763010-764239	LDFNMNDI_00752

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:764211-764783	LDFNMNDI_00753

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:764796-766160	LDFNMNDI_00754

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:766162-766443	LDFNMNDI_00755

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:766421-766747	LDFNMNDI_00756

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:766737-767075	LDFNMNDI_00757

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:767065-767430	LDFNMNDI_00758

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:767437-768081	LDFNMNDI_00759

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:768081-768545	LDFNMNDI_00760

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:768740-771043	LDFNMNDI_00761

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:771040-771759	LDFNMNDI_00762

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:771756-774578	LDFNMNDI_00763

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:774589-775107	LDFNMNDI_00764

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:775073-775981	LDFNMNDI_00765

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:775981-776775	LDFNMNDI_00766

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:776768-777292	LDFNMNDI_00767

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:777320-777727	LDFNMNDI_00768

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:777729-777866	LDFNMNDI_00769

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:777903-778196	LDFNMNDI_00770

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:778219-778416	LDFNMNDI_00771

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:778427-779446	LDFNMNDI_00772

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system cellobiose-specific EIIC component	contig_1:780200-781606	LDFNMNDI_00773

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:781689-781961	LDFNMNDI_00774

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Catabolite control protein B	contig_1:781976-782899	LDFNMNDI_00775

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional activator mta	contig_1:c783767-783015	LDFNMNDI_00776

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:783990-784346	LDFNMNDI_00777

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c786114-784573	LDFNMNDI_00778

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:786555-789350	LDFNMNDI_00779

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:789424-789720	LDFNMNDI_00780

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:789710-790282	LDFNMNDI_00781

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:790306-790929	LDFNMNDI_00782

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:791036-792064	LDFNMNDI_00783

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nicotinate phosphoribosyltransferase pncB2	contig_1:792493-793965	LDFNMNDI_00784

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NH(3)-dependent NAD(+) synthetase	contig_1:793977-794801	LDFNMNDI_00785

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c795766-794876	LDFNMNDI_00786

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	contig_1:795968-796969	LDFNMNDI_00787

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Raffinose permease	contig_1:796987-798225	LDFNMNDI_00788

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arabinose metabolism transcriptional repressor	contig_1:798343-799422	LDFNMNDI_00789

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-xylose transporter	contig_1:c800980-799580	LDFNMNDI_00790

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xylulose kinase	contig_1:801199-802860	LDFNMNDI_00791

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-ribulose-5-phosphate 4-epimerase SgbE	contig_1:802817-803515	LDFNMNDI_00792

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose isomerase	contig_1:803531-804955	LDFNMNDI_00793

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glyoxylate/hydroxypyruvate reductase B	contig_1:805263-806423	LDFNMNDI_00794

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:806541-808400	LDFNMNDI_00795

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:808510-808944	LDFNMNDI_00796

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c809362-809201	LDFNMNDI_00797

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-phosphogluconolactonase	contig_1:c810403-809381	LDFNMNDI_00798

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:810531-810884	LDFNMNDI_00799

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:810896-812062	LDFNMNDI_00800

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	FMN-dependent NADH-azoreductase	contig_1:c812771-812151	LDFNMNDI_00801

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiosulfate sulfurtransferase GlpE	contig_1:c813258-812962	LDFNMNDI_00802

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:813462-814112	LDFNMNDI_00803

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:814128-815855	LDFNMNDI_00804

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fatty acid ABC transporter ATP-binding/permease protein	contig_1:815852-817744	LDFNMNDI_00805

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Catechol-2,3-dioxygenase	contig_1:817949-818818	LDFNMNDI_00806

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetylmuramyl-L-alanine amidase	contig_1:819027-820052	LDFNMNDI_00807

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative mannose-6-phosphate isomerase GmuF	contig_1:820091-821041	LDFNMNDI_00808

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:821134-822837	LDFNMNDI_00809

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator MtlR	contig_1:822839-824872	LDFNMNDI_00810

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mannitol-specific phosphotransferase enzyme IIA component	contig_1:824883-825323	LDFNMNDI_00811

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c826395-825433	LDFNMNDI_00812

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c826559-826422	LDFNMNDI_00813

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC transporter ATP-binding protein NatA	contig_1:c827239-826562	LDFNMNDI_00814

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:827503-829269	LDFNMNDI_00815

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mannitol-specific phosphotransferase enzyme IIA component	contig_1:829284-829721	LDFNMNDI_00816

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mannitol-1-phosphate 5-dehydrogenase	contig_1:829734-830885	LDFNMNDI_00817

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD	contig_1:c831645-830947	LDFNMNDI_00818

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT	contig_1:c832990-831638	LDFNMNDI_00819

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Potassium/sodium uptake protein NtpJ	contig_1:c834611-833211	LDFNMNDI_00820

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Epoxyqueuosine reductase QueH	contig_1:834772-835509	LDFNMNDI_00821

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:835634-836113	LDFNMNDI_00822

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:836110-836877	LDFNMNDI_00823

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Signal peptidase IB	contig_1:837051-837620	LDFNMNDI_00824

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c837975-837742	LDFNMNDI_00825

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	contig_1:c838331-837972	LDFNMNDI_00826

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thymidine kinase	contig_1:838640-839236	LDFNMNDI_00827

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide chain release factor 1	contig_1:839239-840312	LDFNMNDI_00828

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Release factor glutamine methyltransferase	contig_1:840305-841144	LDFNMNDI_00829

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Threonylcarbamoyl-AMP synthase	contig_1:841338-842363	LDFNMNDI_00830

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:842360-842512	LDFNMNDI_00831

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine hydroxymethyltransferase	contig_1:842529-843773	LDFNMNDI_00832

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carboxylesterase NlhH	contig_1:843928-844875	LDFNMNDI_00833

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uracil phosphoribosyltransferase	contig_1:845009-845638	LDFNMNDI_00834

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c846018-845776	LDFNMNDI_00835

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactococcin-A immunity protein	contig_1:846350-846649	LDFNMNDI_00837

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:846844-848016	LDFNMNDI_00838

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:848445-848726	LDFNMNDI_00839

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:848726-848815	LDFNMNDI_00840

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Collagen adhesin	contig_1:848894-851170	LDFNMNDI_00841

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS982 family transposase ISEfm1	contig_1:851290-852198	LDFNMNDI_00842

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Prolyl-tRNA editing protein ProX	contig_1:c853136-852651	LDFNMNDI_00843

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-cystine transport system permease protein YecS	contig_1:853615-854256	LDFNMNDI_00844

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamine transport ATP-binding protein GlnQ	contig_1:854275-854910	LDFNMNDI_00845

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative amino-acid ABC transporter-binding protein	contig_1:854928-855743	LDFNMNDI_00846

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aryl-phospho-beta-D-glucosidase BglC	contig_1:855898-857334	LDFNMNDI_00847

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA translocase SpoIIIE	contig_1:857523-859970	LDFNMNDI_00848

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative dual-specificity RNA methyltransferase RlmN	contig_1:860204-861271	LDFNMNDI_00849

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c862568-861465	LDFNMNDI_00850

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS4 family transposase IS4Bsu1	contig_1:c864260-863154	LDFNMNDI_00851

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:864496-865044	LDFNMNDI_00852

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dipeptide-binding protein DppE	contig_1:865467-867128	LDFNMNDI_00853

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c867545-867198	LDFNMNDI_00854

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport system permease protein OppB	contig_1:867629-868570	LDFNMNDI_00855

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dipeptide transport system permease protein DppC	contig_1:868571-869614	LDFNMNDI_00856

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppD	contig_1:869620-870690	LDFNMNDI_00857

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligopeptide transport ATP-binding protein OppF	contig_1:870680-871633	LDFNMNDI_00858

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS200/IS605 family transposase ISEfa4	contig_1:871645-872655	LDFNMNDI_00859

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c873759-872938	LDFNMNDI_00860

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c874135-873857	LDFNMNDI_00861

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine--tRNA ligase	contig_1:874404-876413	LDFNMNDI_00862

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c876740-876468	LDFNMNDI_00863

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c877476-876889	LDFNMNDI_00864

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine exchanger SteT	contig_1:877651-878973	LDFNMNDI_00865

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-aminoacyl-tRNA deacylase	contig_1:879128-879904	LDFNMNDI_00866

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease M5	contig_1:879906-880466	LDFNMNDI_00867

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase A	contig_1:880459-881343	LDFNMNDI_00868

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Niacin transporter NiaX	contig_1:881657-882286	LDFNMNDI_00869

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligosaccharides import ATP-binding protein MsmX	contig_1:c883514-882405	LDFNMNDI_00870

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methylglyoxal synthase	contig_1:883723-884145	LDFNMNDI_00871

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Folate transporter FolT	contig_1:884468-885004	LDFNMNDI_00872

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:c886807-885044	LDFNMNDI_00873

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:c888525-886810	LDFNMNDI_00874

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c889009-888806	LDFNMNDI_00875

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:889124-889747	LDFNMNDI_00876

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c890221-889997	LDFNMNDI_00877

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DagR	contig_1:890415-893192	LDFNMNDI_00878

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIAB component	contig_1:893272-893691	LDFNMNDI_00879

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative phosphotransferase enzyme IIB component	contig_1:893703-894173	LDFNMNDI_00880

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system sorbose-specific EIIC component	contig_1:894190-894969	LDFNMNDI_00881

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIID component	contig_1:894956-895777	LDFNMNDI_00882

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	contig_1:895794-896843	LDFNMNDI_00883

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fructosamine deglycase FrlB	contig_1:896856-897860	LDFNMNDI_00884

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lytic chitin monooxygenase	contig_1:c898568-897924	LDFNMNDI_00885

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c899584-898700	LDFNMNDI_00886

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:899791-901527	LDFNMNDI_00887

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	contig_1:902257-903276	LDFNMNDI_00888

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UTP--glucose-1-phosphate uridylyltransferase	contig_1:903319-904200	LDFNMNDI_00889

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:904501-904878	LDFNMNDI_00890

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:905484-906098	LDFNMNDI_00891

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:906871-908610	LDFNMNDI_00892

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Isoaspartyl dipeptidase	contig_1:908771-909955	LDFNMNDI_00893

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:910067-910270	LDFNMNDI_00894

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoprotein-releasing system ATP-binding protein LolD	contig_1:c911032-910370	LDFNMNDI_00895

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c912541-911045	LDFNMNDI_00896

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease J 2	contig_1:913089-914768	LDFNMNDI_00897

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	contig_1:914897-915373	LDFNMNDI_00898

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:915587-916267	LDFNMNDI_00899

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inosine-5'-monophosphate dehydrogenase	contig_1:916275-917606	LDFNMNDI_00900

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative bifunctional oligoribonuclease and PAP phosphatase NrnA	contig_1:917621-918583	LDFNMNDI_00901

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:918695-919033	LDFNMNDI_00902

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:919112-919819	LDFNMNDI_00903

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c921338-919848	LDFNMNDI_00904

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:921661-922194	LDFNMNDI_00905

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase F	contig_1:922272-923642	LDFNMNDI_00906

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:923718-924053	LDFNMNDI_00907

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Leucine-rich protein	contig_1:c924991-924134	LDFNMNDI_00908

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA-specific adenosine deaminase	contig_1:925097-925594	LDFNMNDI_00909

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:925939-927324	LDFNMNDI_00910

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:927361-928038	LDFNMNDI_00911

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acid sugar phosphatase	contig_1:928046-928810	LDFNMNDI_00912

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:928812-929471	LDFNMNDI_00913

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YpjQ	contig_1:c930007-929498	LDFNMNDI_00914

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ferredoxin--NADP reductase 2	contig_1:c931117-930119	LDFNMNDI_00915

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative peptidyl-prolyl cis-trans isomerase	contig_1:931329-931913	LDFNMNDI_00916

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cystathionine beta-lyase PatB	contig_1:c933164-931989	LDFNMNDI_00917

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	General stress protein 13	contig_1:933246-933626	LDFNMNDI_00918

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:933702-934064	LDFNMNDI_00919

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putrescine carbamoyltransferase	contig_1:941391-942425	LDFNMNDI_00924

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glutamate/gamma-aminobutyrate antiporter	contig_1:942536-943924	LDFNMNDI_00925

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative agmatine deiminase	contig_1:943911-945017	LDFNMNDI_00926

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carbamate kinase 1	contig_1:945014-945208	LDFNMNDI_00927

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:945293-946252	LDFNMNDI_00928

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aryl-phospho-beta-D-glucosidase BglA	contig_1:946511-947158	LDFNMNDI_00929

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:947471-947845	LDFNMNDI_00930

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c949623-949459	LDFNMNDI_00933

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aminopeptidase C	contig_1:949919-951247	LDFNMNDI_00934

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ketoamine kinase	contig_1:951454-952287	LDFNMNDI_00935

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:952303-953040	LDFNMNDI_00936

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:c954523-953306	LDFNMNDI_00937

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-asparaginase 2	contig_1:c955775-954807	LDFNMNDI_00938

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:956006-956839	LDFNMNDI_00939

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Stress response protein YhaX	contig_1:956873-957712	LDFNMNDI_00940

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:957738-958298	LDFNMNDI_00941

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Septation ring formation regulator EzrA	contig_1:958497-960218	LDFNMNDI_00942

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine desulfurase IscS	contig_1:960384-961526	LDFNMNDI_00943

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative tRNA sulfurtransferase	contig_1:961542-962753	LDFNMNDI_00944

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Redox-sensing transcriptional repressor Rex	contig_1:963017-963664	LDFNMNDI_00945

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Valine--tRNA ligase	contig_1:964057-966702	LDFNMNDI_00946

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Folylpolyglutamate synthase	contig_1:966743-968212	LDFNMNDI_00947

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphorylated carbohydrates phosphatase	contig_1:968202-968855	LDFNMNDI_00948

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:968910-969602	LDFNMNDI_00949

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock-like protein CspLA	contig_1:969752-969952	LDFNMNDI_00950

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease J 1	contig_1:c971889-970210	LDFNMNDI_00951

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c972103-971891	LDFNMNDI_00952

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:972496-974226	LDFNMNDI_00953

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:974223-975983	LDFNMNDI_00954

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein YrdA	contig_1:976424-976909	LDFNMNDI_00955

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent Clp protease proteolytic subunit	contig_1:c977604-977011	LDFNMNDI_00956

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:977784-978311	LDFNMNDI_00957

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerophosphodiester phosphodiesterase	contig_1:978402-979139	LDFNMNDI_00958

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA dimethylallyltransferase	contig_1:979143-980060	LDFNMNDI_00959

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTPase HflX	contig_1:980062-981291	LDFNMNDI_00960

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GlnR	contig_1:981520-981912	LDFNMNDI_00961

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamine synthetase	contig_1:981940-983280	LDFNMNDI_00962

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	CTP synthase	contig_1:984058-985668	LDFNMNDI_00963

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fructose-bisphosphate aldolase	contig_1:985962-986831	LDFNMNDI_00964

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:987000-987959	LDFNMNDI_00965

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	contig_1:988064-989335	LDFNMNDI_00966

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription termination factor Rho	contig_1:989332-990627	LDFNMNDI_00967

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L31 type B	contig_1:990726-990989	LDFNMNDI_00968

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c991977-991081	LDFNMNDI_00969

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:992355-992669	LDFNMNDI_00970

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:992662-992844	LDFNMNDI_00971

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:993002-993364	LDFNMNDI_00972

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:993530-994243	LDFNMNDI_00973

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:994432-994674	LDFNMNDI_00974

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIABC component	contig_1:995006-995455	LDFNMNDI_00975

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIABC component	contig_1:995512-996930	LDFNMNDI_00976

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-tagatose-1,6-bisphosphate aldolase subunit KbaY	contig_1:996930-997790	LDFNMNDI_00977

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional regulator YdjF	contig_1:998000-998737	LDFNMNDI_00978

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:998893-999258	LDFNMNDI_00979

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative MFS-type transporter YfcJ	contig_1:c1000543-999335	LDFNMNDI_00980

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1000840-1000562	LDFNMNDI_00981

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactate racemization regulatory protein	contig_1:1000994-1001689	LDFNMNDI_00982

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1002868-1002071	LDFNMNDI_00983

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1004049-1002865	LDFNMNDI_00984

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1005321-1004074	LDFNMNDI_00985

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holliday junction ATP-dependent DNA helicase RuvB	contig_1:1005536-1007281	LDFNMNDI_00986

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleoid-associated protein	contig_1:1007302-1007616	LDFNMNDI_00987

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Recombination protein RecR	contig_1:1007641-1008237	LDFNMNDI_00988

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thymidylate kinase	contig_1:1008301-1008945	LDFNMNDI_00989

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cyclic di-AMP receptor A	contig_1:1008960-1009289	LDFNMNDI_00990

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1009303-1010241	LDFNMNDI_00991

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1010277-1011101	LDFNMNDI_00992

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Initiation-control protein YabA	contig_1:1011094-1011441	LDFNMNDI_00993

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase I	contig_1:1011510-1012382	LDFNMNDI_00994

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase IV	contig_1:1012491-1013612	LDFNMNDI_00995

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1014268-1013666	LDFNMNDI_00996

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Anaerobic ribonucleoside-triphosphate reductase	contig_1:c1016895-1014706	LDFNMNDI_00997

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bacitracin export ATP-binding protein BceA	contig_1:1017215-1017982	LDFNMNDI_00998

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bacitracin export permease protein BceB	contig_1:1017972-1020014	LDFNMNDI_00999

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1020420-1020569	LDFNMNDI_01000

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanine--D-alanyl carrier protein ligase	contig_1:1020580-1022094	LDFNMNDI_01001

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1022091-1023296	LDFNMNDI_01002

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanyl carrier protein	contig_1:1023341-1023574	LDFNMNDI_01003

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein DltD	contig_1:1023577-1024842	LDFNMNDI_01004

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative aminopeptidase YsdC	contig_1:1024984-1026066	LDFNMNDI_01005

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1026066-1026869	LDFNMNDI_01006

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1026936-1027679	LDFNMNDI_01007

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoate-protein ligase LplJ	contig_1:1027690-1028694	LDFNMNDI_01008

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1030583-1028739	LDFNMNDI_01009

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1030923-1031312	LDFNMNDI_01010

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA 5-hydroxyuridine methyltransferase	contig_1:1031440-1032123	LDFNMNDI_01011

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1032664-1033023	LDFNMNDI_01013

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	C4-dicarboxylic acid transporter DauA	contig_1:1033146-1034777	LDFNMNDI_01014

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Type-4 uracil-DNA glycosylase	contig_1:c1035480-1034839	LDFNMNDI_01015

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L21	contig_1:1035762-1036070	LDFNMNDI_01016

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1036097-1036441	LDFNMNDI_01017

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L27	contig_1:1036454-1036747	LDFNMNDI_01018

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:c1038155-1036938	LDFNMNDI_01019

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DagR	contig_1:1038767-1041601	LDFNMNDI_01020

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIAB component	contig_1:1041792-1042283	LDFNMNDI_01021

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIAB component	contig_1:1042386-1043357	LDFNMNDI_01022

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system sorbose-specific EIIC component	contig_1:1043391-1044203	LDFNMNDI_01023

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIID component	contig_1:1044221-1045135	LDFNMNDI_01024

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Surfactin synthase subunit 1	contig_1:1045204-1047621	LDFNMNDI_01025

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:c1048572-1047613	LDFNMNDI_01026

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Gramicidin S synthase 2	contig_1:1048630-1057308	LDFNMNDI_01027

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Linear gramicidin synthase subunit D	contig_1:1057329-1062161	LDFNMNDI_01028

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartate 1-decarboxylase	contig_1:1062162-1062557	LDFNMNDI_01029

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1062560-1063471	LDFNMNDI_01030

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanine--D-alanyl carrier protein ligase	contig_1:1063535-1065961	LDFNMNDI_01031

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1065961-1066596	LDFNMNDI_01032

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1066736-1067110	LDFNMNDI_01033

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1067194-1067439	LDFNMNDI_01034

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aminopeptidase YpdF	contig_1:1067612-1068676	LDFNMNDI_01035

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1068923-1069348	LDFNMNDI_01036

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription antitermination protein NusB	contig_1:1069341-1069790	LDFNMNDI_01037

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional protein FolD protein	contig_1:1069887-1070741	LDFNMNDI_01038

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Exodeoxyribonuclease 7 large subunit	contig_1:1070742-1072079	LDFNMNDI_01039

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Exodeoxyribonuclease 7 small subunit	contig_1:1072084-1072308	LDFNMNDI_01040

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Farnesyl diphosphate synthase	contig_1:1072310-1073200	LDFNMNDI_01041

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Hemolysin A	contig_1:1073209-1074027	LDFNMNDI_01042

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine repressor	contig_1:1074134-1074583	LDFNMNDI_01043

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA repair protein RecN	contig_1:1074601-1076283	LDFNMNDI_01044

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1076455-1076339	LDFNMNDI_01045

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1077484-1076528	LDFNMNDI_01046

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1077655-1078023	LDFNMNDI_01047

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator MraZ	contig_1:1078193-1078624	LDFNMNDI_01048

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase H	contig_1:1078645-1079604	LDFNMNDI_01049

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein FtsL	contig_1:1079609-1080010	LDFNMNDI_01050

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Penicillin-binding protein 2X	contig_1:1080011-1082203	LDFNMNDI_01051

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phospho-N-acetylmuramoyl-pentapeptide-transferase	contig_1:1082229-1083191	LDFNMNDI_01052

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylmuramoylalanine--D-glutamate ligase	contig_1:1083205-1084566	LDFNMNDI_01053

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	contig_1:1084592-1085680	LDFNMNDI_01054

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein DivIB	contig_1:1085695-1086927	LDFNMNDI_01055

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein FtsA	contig_1:1087083-1088408	LDFNMNDI_01056

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein FtsZ	contig_1:1088431-1089672	LDFNMNDI_01057

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyridoxal phosphate homeostasis protein	contig_1:1089689-1090366	LDFNMNDI_01058

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein SepF	contig_1:1090380-1090979	LDFNMNDI_01059

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1091330-1092112	LDFNMNDI_01060

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein DivIVA	contig_1:1092133-1092840	LDFNMNDI_01061

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Isoleucine--tRNA ligase	contig_1:1093101-1095899	LDFNMNDI_01062

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucose-6-phosphate 1-dehydrogenase	contig_1:c1097474-1095948	LDFNMNDI_01063

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diphtheria toxin repressor	contig_1:c1098136-1097489	LDFNMNDI_01064

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1098651-1098310	LDFNMNDI_01065

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sugar fermentation stimulation protein A	contig_1:1098816-1099544	LDFNMNDI_01066

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	contig_1:1099560-1100573	LDFNMNDI_01067

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ATP-dependent RNA helicase YfmL	contig_1:1100573-1101850	LDFNMNDI_01068

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DagR	contig_1:1101913-1104615	LDFNMNDI_01069

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactose-specific EIIB component	contig_1:1104766-1105083	LDFNMNDI_01070

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan-specific phosphotransferase enzyme IIA component	contig_1:1105112-1105432	LDFNMNDI_01071

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system cellobiose-specific EIIC component	contig_1:1105540-1107000	LDFNMNDI_01072

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1107068-1107289	LDFNMNDI_01073

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1107321-1107503	LDFNMNDI_01074

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1107503-1107916	LDFNMNDI_01075

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetyltransferase Eis	contig_1:1108040-1109221	LDFNMNDI_01076

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1109457-1109293	LDFNMNDI_01077

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1110319-1110870	LDFNMNDI_01079

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aminopeptidase PepS	contig_1:c1112249-1111017	LDFNMNDI_01080

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1112505-1113074	LDFNMNDI_01081

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Flavodoxin	contig_1:c1113690-1113250	LDFNMNDI_01082

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine aminopeptidase 1	contig_1:1113848-1114612	LDFNMNDI_01083

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1114644-1115567	LDFNMNDI_01084

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase	contig_1:1115643-1116782	LDFNMNDI_01085

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1116775-1117575	LDFNMNDI_01086

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1117575-1118402	LDFNMNDI_01087

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1118407-1119114	LDFNMNDI_01088

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucose-1-phosphate thymidylyltransferase 1	contig_1:1119214-1120080	LDFNMNDI_01089

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	dTDP-4-dehydrorhamnose 3,5-epimerase	contig_1:1120094-1120666	LDFNMNDI_01090

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	dTDP-glucose 4,6-dehydratase	contig_1:1120688-1121716	LDFNMNDI_01091

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	dTDP-4-dehydrorhamnose reductase	contig_1:1121814-1122665	LDFNMNDI_01092

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1122700-1124733	LDFNMNDI_01093

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1124834-1126057	LDFNMNDI_01094

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Teichoic acid translocation permease protein TagG	contig_1:1126266-1127072	LDFNMNDI_01095

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:1127084-1128304	LDFNMNDI_01096

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase A	contig_1:1128294-1129880	LDFNMNDI_01097

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	contig_1:1129919-1132057	LDFNMNDI_01098

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1132260-1133651	LDFNMNDI_01099

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-Gal:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-galactosyltransferase	contig_1:1133689-1134519	LDFNMNDI_01100

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	contig_1:1134491-1135480	LDFNMNDI_01101

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	contig_1:1135594-1136589	LDFNMNDI_01102

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Teichoic acid poly(glycerol phosphate) polymerase	contig_1:1136593-1137735	LDFNMNDI_01103

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative O-antigen transporter	contig_1:1137732-1139159	LDFNMNDI_01104

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS21 family transposase IS232	contig_1:c1140540-1139800	LDFNMNDI_01105

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1141768-1140530	LDFNMNDI_01106

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1142682-1142269	LDFNMNDI_01107

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol-3-phosphate cytidylyltransferase	contig_1:c1143268-1142858	LDFNMNDI_01108

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1143393-1144784	LDFNMNDI_01109

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylglucosamine 4-epimerase	contig_1:1144918-1145862	LDFNMNDI_01110

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:c1147224-1146052	LDFNMNDI_01111

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1147504-1149228	LDFNMNDI_01112

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative penicillin-binding protein PbpX	contig_1:c1150652-1149492	LDFNMNDI_01113

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endolytic murein transglycosylase	contig_1:1150817-1151992	LDFNMNDI_01114

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription elongation factor GreA	contig_1:1152128-1152607	LDFNMNDI_01115

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1152776-1153507	LDFNMNDI_01116

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase LiaS	contig_1:1153504-1154571	LDFNMNDI_01117

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Response regulator protein VraR	contig_1:1154578-1155210	LDFNMNDI_01118

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ktr system potassium uptake protein A	contig_1:1155351-1156016	LDFNMNDI_01119

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1156033-1156326	LDFNMNDI_01120

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glyoxylate/hydroxypyruvate reductase B	contig_1:c1157333-1156386	LDFNMNDI_01121

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1158431-1157628	LDFNMNDI_01122

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cadmium, cobalt and zinc/H(+)-K(+) antiporter	contig_1:1158592-1159470	LDFNMNDI_01123

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1159539-1160009	LDFNMNDI_01124

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Superoxide dismutase [Mn]	contig_1:1160094-1160702	LDFNMNDI_01125

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock protein CspD	contig_1:1160836-1161036	LDFNMNDI_01126

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1162534-1161086	LDFNMNDI_01127

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1163073-1164098	LDFNMNDI_01128

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1164186-1165112	LDFNMNDI_01129

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1165221-1166900	LDFNMNDI_01130

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1166906-1167145	LDFNMNDI_01131

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase	contig_1:1167184-1168674	LDFNMNDI_01132

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU	contig_1:1169032-1170258	LDFNMNDI_01133

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tryptophan-rich protein TspO	contig_1:c1170846-1170376	LDFNMNDI_01134

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1171123-1172670	LDFNMNDI_01135

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lytic chitin monooxygenase	contig_1:1172828-1173406	LDFNMNDI_01136

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	23S rRNA (uracil-C(5))-methyltransferase RlmCD	contig_1:c1174960-1173578	LDFNMNDI_01137

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein RecX	contig_1:1175067-1175864	LDFNMNDI_01138

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenine DNA glycosylase	contig_1:1175857-1177035	LDFNMNDI_01139

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1177129-1177662	LDFNMNDI_01140

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyltransferase	contig_1:c1178179-1177745	LDFNMNDI_01141

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative transport protein YhhT	contig_1:1178321-1179439	LDFNMNDI_01142

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1179567-1180943	LDFNMNDI_01143

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide chain release factor 3	contig_1:1181339-1182919	LDFNMNDI_01144

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1183210-1183461	LDFNMNDI_01145

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1183822-1183502	LDFNMNDI_01146

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent Clp protease ATP-binding subunit ClpE	contig_1:c1186340-1184106	LDFNMNDI_01147

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphocarrier protein HPr	contig_1:1186817-1187083	LDFNMNDI_01148

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoenolpyruvate-protein phosphotransferase	contig_1:1187083-1188810	LDFNMNDI_01149

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Processive diacylglycerol alpha-glucosyltransferase	contig_1:1188981-1190027	LDFNMNDI_01150

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alpha-monoglucosyldiacylglycerol synthase	contig_1:1190044-1191267	LDFNMNDI_01151

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-hydroxy-3-oxopropionate reductase	contig_1:1191356-1192243	LDFNMNDI_01152

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YkuJ	contig_1:1192329-1192559	LDFNMNDI_01153

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein C	contig_1:c1193581-1192616	LDFNMNDI_01154

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator SlyA	contig_1:1193888-1194328	LDFNMNDI_01155

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-oxoacyl-[acyl-carrier-protein] synthase 3	contig_1:1194338-1195300	LDFNMNDI_01156

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acyl carrier protein	contig_1:1195354-1195578	LDFNMNDI_01157

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Malonyl CoA-acyl carrier protein transacylase	contig_1:1195685-1196602	LDFNMNDI_01158

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-oxoacyl-[acyl-carrier-protein] reductase FabG	contig_1:1196614-1197351	LDFNMNDI_01159

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-oxoacyl-[acyl-carrier-protein] synthase 2	contig_1:1197370-1198605	LDFNMNDI_01160

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Biotin carboxyl carrier protein of acetyl-CoA carboxylase	contig_1:1198608-1199084	LDFNMNDI_01161

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	contig_1:1199109-1199528	LDFNMNDI_01162

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-oxoglutarate carboxylase small subunit	contig_1:1199536-1200915	LDFNMNDI_01163

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	contig_1:1200916-1201785	LDFNMNDI_01164

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	contig_1:1201778-1202563	LDFNMNDI_01165

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyrophosphatase PpaX	contig_1:1202791-1203318	LDFNMNDI_01166

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YqeH	contig_1:1203315-1204424	LDFNMNDI_01167

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA-binding protein	contig_1:1204440-1204751	LDFNMNDI_01168

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nicotinate-nucleotide adenylyltransferase	contig_1:1204761-1205411	LDFNMNDI_01169

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1205395-1205988	LDFNMNDI_01170

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal silencing factor RsfS	contig_1:1206109-1206369	LDFNMNDI_01171

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine/sarcosine N-methyltransferase	contig_1:1206373-1207113	LDFNMNDI_01172

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA(Met) cytidine acetate ligase	contig_1:1207333-1208484	LDFNMNDI_01173

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative transcriptional regulatory protein	contig_1:1208615-1209334	LDFNMNDI_01174

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1209513-1210160	LDFNMNDI_01175

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA helicase IV	contig_1:c1212522-1210243	LDFNMNDI_01176

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc-transporting ATPase	contig_1:1212800-1214623	LDFNMNDI_01177

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative tautomerase	contig_1:1214670-1214849	LDFNMNDI_01178

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Threonine--tRNA ligase	contig_1:1215185-1217128	LDFNMNDI_01179

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional regulator YbbH	contig_1:1217351-1218199	LDFNMNDI_01180

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Penicillin-binding protein 2B	contig_1:1218505-1220658	LDFNMNDI_01181

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU	contig_1:c1221774-1220962	LDFNMNDI_01182

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Guanine/hypoxanthine permease PbuO	contig_1:1222067-1223503	LDFNMNDI_01183

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Staphyloferrin B transporter	contig_1:1223673-1224869	LDFNMNDI_01184

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1225115-1224930	LDFNMNDI_01185

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase III subunit alpha	contig_1:1225345-1228656	LDFNMNDI_01186

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent 6-phosphofructokinase	contig_1:1228824-1229786	LDFNMNDI_01187

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate kinase	contig_1:1229860-1231644	LDFNMNDI_01188

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GltC	contig_1:c1232578-1231673	LDFNMNDI_01189

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1232764-1233333	LDFNMNDI_01190

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L32	contig_1:1233391-1233570	LDFNMNDI_01191

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-phosphogluconate dehydrogenase, decarboxylating	contig_1:1233741-1235162	LDFNMNDI_01192

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Response regulator ArlR	contig_1:1235354-1236040	LDFNMNDI_01193

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adaptive-response sensory-kinase SasA	contig_1:1236037-1237542	LDFNMNDI_01194

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lichenan permease IIC component	contig_1:1244945-1246249	LDFNMNDI_01214

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1246274-1246534	LDFNMNDI_01215

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Blasticidin-S deaminase	contig_1:1246712-1247110	LDFNMNDI_01216

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1247205-1247714	LDFNMNDI_01217

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1247845-1248672	LDFNMNDI_01218

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein MalY	contig_1:c1249949-1248762	LDFNMNDI_01219

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system maltose-specific EIICB component	contig_1:c1251538-1249970	LDFNMNDI_01220

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional regulator YbbH	contig_1:c1252478-1251708	LDFNMNDI_01221

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1252650-1253000	LDFNMNDI_01222

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol-3-phosphate regulon repressor	contig_1:c1253878-1253108	LDFNMNDI_01223

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative L-ascorbate-6-phosphate lactonase UlaG	contig_1:1254096-1255163	LDFNMNDI_01224

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1255181-1255642	LDFNMNDI_01225

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIC component	contig_1:1255662-1257146	LDFNMNDI_01226

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIB component	contig_1:1257188-1257487	LDFNMNDI_01227

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-keto-L-gulonate-6-phosphate decarboxylase SgbH	contig_1:1257502-1258140	LDFNMNDI_01228

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-ribulose-5-phosphate 3-epimerase UlaE	contig_1:1258145-1259005	LDFNMNDI_01229

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-ribulose-5-phosphate 4-epimerase AraD	contig_1:1258995-1259705	LDFNMNDI_01230

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1259938-1260345	LDFNMNDI_01231

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1260744-1260445	LDFNMNDI_01232

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1261001-1260807	LDFNMNDI_01233

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:1261183-1262142	LDFNMNDI_01234

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1262727-1263143	LDFNMNDI_01235

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative phosphotransferase enzyme IIB component	contig_1:1263203-1263694	LDFNMNDI_01236

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetylgalactosamine permease IIC component 1	contig_1:1263708-1264517	LDFNMNDI_01237

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIID component	contig_1:1264514-1265341	LDFNMNDI_01238

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative HAD-hydrolase YfnB	contig_1:1265335-1266045	LDFNMNDI_01239

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Anaerobic nitric oxide reductase transcription regulator NorR	contig_1:1266216-1268729	LDFNMNDI_01240

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1269212-1271074	LDFNMNDI_01241

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1271074-1271406	LDFNMNDI_01242

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1271426-1271782	LDFNMNDI_01243

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1271798-1272148	LDFNMNDI_01244

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1272258-1272956	LDFNMNDI_01245

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1272967-1273644	LDFNMNDI_01246

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deacetylase	contig_1:1273663-1274769	LDFNMNDI_01247

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-glucosaminate-6-phosphate ammonia lyase	contig_1:1274759-1275850	LDFNMNDI_01248

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydro-3-deoxy-phosphogluconate aldolase	contig_1:1275863-1276603	LDFNMNDI_01249

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIBCA component	contig_1:1276895-1278835	LDFNMNDI_01250

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator ManR	contig_1:1279001-1280836	LDFNMNDI_01251

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Energy-coupling factor transporter transmembrane protein EcfT	contig_1:c1281907-1281074	LDFNMNDI_01252

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative HMP/thiamine import ATP-binding protein YkoD	contig_1:c1283582-1281894	LDFNMNDI_01253

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1284150-1283599	LDFNMNDI_01254

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arsenate reductase	contig_1:c1285162-1284740	LDFNMNDI_01255

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	F420-dependent glucose-6-phosphate dehydrogenase	contig_1:1285570-1286592	LDFNMNDI_01256

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional regulator	contig_1:c1287151-1286717	LDFNMNDI_01257

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1287266-1288240	LDFNMNDI_01258

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose-6-phosphate kinase	contig_1:c1289362-1288409	LDFNMNDI_01259

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose phosphotransferase system repressor	contig_1:c1290119-1289328	LDFNMNDI_01260

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1290342-1290800	LDFNMNDI_01261

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactitol-specific EIIB component	contig_1:1290812-1291111	LDFNMNDI_01262

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactitol-specific EIIC component	contig_1:1291122-1292543	LDFNMNDI_01263

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1292565-1292825	LDFNMNDI_01264

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methylthioribulose-1-phosphate dehydratase	contig_1:1292839-1293591	LDFNMNDI_01265

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative hydrolase MhqD	contig_1:c1294289-1293684	LDFNMNDI_01266

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative ring-cleaving dioxygenase MhqA	contig_1:c1295316-1294342	LDFNMNDI_01267

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GmuR	contig_1:c1296509-1295790	LDFNMNDI_01268

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system oligo-beta-mannoside-specific EIIC component	contig_1:c1297908-1296637	LDFNMNDI_01269

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-phospho-beta-glucosidase GmuD	contig_1:1298062-1299459	LDFNMNDI_01270

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative universal stress protein	contig_1:1299540-1299980	LDFNMNDI_01271

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1300128-1300454	LDFNMNDI_01272

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1300455-1301204	LDFNMNDI_01273

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein Spx	contig_1:c1301807-1301352	LDFNMNDI_01274

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1302504-1302292	LDFNMNDI_01275

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	contig_1:1302799-1303614	LDFNMNDI_01276

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Major cardiolipin synthase ClsA	contig_1:c1305251-1303800	LDFNMNDI_01277

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Calcium-transporting ATPase	contig_1:1305593-1308259	LDFNMNDI_01278

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:c1309786-1308569	LDFNMNDI_01279

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	contig_1:1310173-1310925	LDFNMNDI_01280

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Hydroxymethylglutaryl-CoA synthase	contig_1:c1312102-1310948	LDFNMNDI_01281

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-ketoacyl-CoA thiolase	contig_1:1312287-1314728	LDFNMNDI_01282

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1314885-1315658	LDFNMNDI_01283

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1317088-1316384	LDFNMNDI_01284

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1317519-1317274	LDFNMNDI_01285

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glyoxal reductase	contig_1:c1318387-1317536	LDFNMNDI_01286

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1318553-1319557	LDFNMNDI_01287

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1320207-1319851	LDFNMNDI_01288

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor Tu	contig_1:1320575-1321762	LDFNMNDI_01289

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphatidylglycerol lysyltransferase	contig_1:c1324543-1321952	LDFNMNDI_01290

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tropinesterase	contig_1:c1325288-1324569	LDFNMNDI_01291

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1325496-1326128	LDFNMNDI_01292

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1326186-1327046	LDFNMNDI_01293

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Calcium-transporting ATPase CtpE	contig_1:1327235-1329550	LDFNMNDI_01294

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA primase	contig_1:1329732-1331573	LDFNMNDI_01295

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA polymerase sigma factor SigA	contig_1:1331597-1332706	LDFNMNDI_01296

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mid-cell-anchored protein Z	contig_1:1332923-1335031	LDFNMNDI_01297

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Conserved virulence factor B	contig_1:1335313-1336176	LDFNMNDI_01298

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ferric uptake regulation protein	contig_1:1336281-1336754	LDFNMNDI_01299

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1336723-1336893	LDFNMNDI_01300

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerD	contig_1:1336850-1337737	LDFNMNDI_01301

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein RibT	contig_1:1337756-1338127	LDFNMNDI_01302

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Segregation and condensation protein A	contig_1:1338124-1338894	LDFNMNDI_01303

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Segregation and condensation protein B	contig_1:1338878-1339453	LDFNMNDI_01304

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal large subunit pseudouridine synthase B	contig_1:1339454-1340170	LDFNMNDI_01305

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Riboflavin transporter FmnP	contig_1:1340500-1341111	LDFNMNDI_01306

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1341488-1343011	LDFNMNDI_01307

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative dipeptidase	contig_1:1343244-1344584	LDFNMNDI_01308

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1344739-1345476	LDFNMNDI_01309

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1345860-1345639	LDFNMNDI_01310

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1345891-1346922	LDFNMNDI_01311

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent DNA helicase RecQ	contig_1:1346909-1348312	LDFNMNDI_01312

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1348378-1349013	LDFNMNDI_01313

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cytidylate kinase	contig_1:1349062-1349742	LDFNMNDI_01314

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S1	contig_1:1349877-1351106	LDFNMNDI_01315

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTPase Der	contig_1:1351288-1352598	LDFNMNDI_01316

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-binding protein HU 1	contig_1:1352841-1353116	LDFNMNDI_01317

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1353350-1354396	LDFNMNDI_01318

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-barrel assembly-enhancing protease	contig_1:1354398-1355657	LDFNMNDI_01319

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1355663-1356244	LDFNMNDI_01320

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1357197-1356322	LDFNMNDI_01321

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YpjD	contig_1:1357345-1357677	LDFNMNDI_01322

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	CCA-adding enzyme	contig_1:1357789-1358997	LDFNMNDI_01323

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1359151-1359606	LDFNMNDI_01324

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1360070-1360345	LDFNMNDI_01325

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sodium, potassium, lithium and rubidium/H(+) antiporter	contig_1:1360358-1362436	LDFNMNDI_01326

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Energy-dependent translational throttle protein EttA	contig_1:1362595-1364478	LDFNMNDI_01327

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thymidylate synthase	contig_1:1364490-1365437	LDFNMNDI_01328

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS1595 family transposase ISSsu9	contig_1:1365457-1365975	LDFNMNDI_01329

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1366692-1366039	LDFNMNDI_01330

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DegV domain-containing protein	contig_1:1366822-1367664	LDFNMNDI_01331

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1367821-1368717	LDFNMNDI_01332

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1368720-1369433	LDFNMNDI_01333

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide methionine sulfoxide reductase MsrA	contig_1:1369453-1369971	LDFNMNDI_01334

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1369968-1370195	LDFNMNDI_01335

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Signal peptidase I V	contig_1:1370345-1370896	LDFNMNDI_01336

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Folate transporter FolT	contig_1:c1371526-1370984	LDFNMNDI_01337

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1372162-1371797	LDFNMNDI_01338

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS1062	contig_1:c1373311-1372352	LDFNMNDI_01339

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome biogenesis GTPase A	contig_1:1373467-1374348	LDFNMNDI_01340

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease HII	contig_1:1374341-1375108	LDFNMNDI_01341

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1375164-1376021	LDFNMNDI_01342

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA topoisomerase 1	contig_1:1376143-1378221	LDFNMNDI_01343

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO	contig_1:1378241-1379566	LDFNMNDI_01344

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerC	contig_1:1379764-1380669	LDFNMNDI_01345

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent protease subunit HslV	contig_1:1380705-1381253	LDFNMNDI_01346

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent protease ATPase subunit ClpY	contig_1:1381267-1382667	LDFNMNDI_01347

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTP-sensing transcriptional pleiotropic repressor CodY	contig_1:1382683-1383474	LDFNMNDI_01348

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein LacX, plasmid	contig_1:1383556-1384431	LDFNMNDI_01349

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol-3-phosphate acyltransferase	contig_1:c1385214-1384576	LDFNMNDI_01350

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YccU	contig_1:1385341-1385775	LDFNMNDI_01351

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA topoisomerase 4 subunit B	contig_1:1385941-1387986	LDFNMNDI_01352

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA topoisomerase 4 subunit A	contig_1:1387998-1390448	LDFNMNDI_01353

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Formate acetyltransferase	contig_1:1390725-1392956	LDFNMNDI_01354

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate formate-lyase-activating enzyme	contig_1:1393200-1393961	LDFNMNDI_01355

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative manganese-dependent inorganic pyrophosphatase	contig_1:1394046-1394972	LDFNMNDI_01356

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1395154-1396035	LDFNMNDI_01357

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1397099-1396467	LDFNMNDI_01358

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1397789-1397247	LDFNMNDI_01359

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1397924-1398313	LDFNMNDI_01360

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1398317-1399075	LDFNMNDI_01361

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative HTH-type transcriptional repressor ExuR	contig_1:1399211-1400158	LDFNMNDI_01362

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1400288-1401028	LDFNMNDI_01363

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1401987-1401319	LDFNMNDI_01364

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1402120-1402407	LDFNMNDI_01365

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1402825-1404363	LDFNMNDI_01366

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:1404360-1405325	LDFNMNDI_01367

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione amide reductase	contig_1:1405312-1406634	LDFNMNDI_01368

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Riboflavin transport system permease protein RibX	contig_1:1406875-1407618	LDFNMNDI_01369

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Formylaminopyrimidine-binding protein	contig_1:1407633-1408625	LDFNMNDI_01370

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aliphatic sulfonates import ATP-binding protein SsuB	contig_1:1408637-1409206	LDFNMNDI_01371

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1409234-1409362	LDFNMNDI_01372

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-aminoacyl-tRNA deacylase	contig_1:1409364-1410086	LDFNMNDI_01373

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1410793-1410170	LDFNMNDI_01374

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:1411188-1411880	LDFNMNDI_01375

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1412598-1412759	LDFNMNDI_01377

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamate-pyruvate aminotransferase AlaA	contig_1:1412906-1414126	LDFNMNDI_01378

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1414313-1415149	LDFNMNDI_01379

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetylgalactosamine-6-phosphate deacetylase	contig_1:1415225-1416373	LDFNMNDI_01380

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1416726-1417781	LDFNMNDI_01381

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	(R)-2-hydroxyglutarate dehydrogenase	contig_1:1417803-1418822	LDFNMNDI_01382

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:1419244-1420461	LDFNMNDI_01383

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DcuR	contig_1:c1421142-1420660	LDFNMNDI_01384

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DcuR	contig_1:c1421377-1421117	LDFNMNDI_01385

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase DcuS	contig_1:c1422995-1421352	LDFNMNDI_01386

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative membrane protein YuaF	contig_1:1423171-1423695	LDFNMNDI_01387

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YqiK	contig_1:1423711-1425210	LDFNMNDI_01388

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1425898-1425296	LDFNMNDI_01389

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1426003-1426959	LDFNMNDI_01390

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	scyllo-inositol 2-dehydrogenase (NADP(+)) IolU	contig_1:c1428342-1427386	LDFNMNDI_01391

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1428516-1429076	LDFNMNDI_01392

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanyl-D-alanine dipeptidase	contig_1:1429069-1429893	LDFNMNDI_01393

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Exo-glucosaminidase LytG	contig_1:1429903-1430520	LDFNMNDI_01394

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1430538-1431227	LDFNMNDI_01395

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative ABC transporter substrate-binding protein YesO	contig_1:1432168-1433451	LDFNMNDI_01396

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraP	contig_1:1433467-1434354	LDFNMNDI_01397

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraQ	contig_1:1434369-1435145	LDFNMNDI_01398

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1435210-1435833	LDFNMNDI_01399

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative oxidoreductase YteT	contig_1:1435830-1437122	LDFNMNDI_01400

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xanthine phosphoribosyltransferase	contig_1:1437691-1438272	LDFNMNDI_01401

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleobase transporter PlUacP	contig_1:1438275-1439582	LDFNMNDI_01402

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N5-carboxyaminoimidazole ribonucleotide mutase	contig_1:1439816-1440304	LDFNMNDI_01403

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N5-carboxyaminoimidazole ribonucleotide synthase	contig_1:1440297-1441421	LDFNMNDI_01404

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenylosuccinate lyase	contig_1:1441434-1442729	LDFNMNDI_01405

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1443286-1442909	LDFNMNDI_01406

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylaminoimidazole-succinocarboxamide synthase	contig_1:1443542-1444270	LDFNMNDI_01407

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylformylglycinamidine synthase subunit PurS	contig_1:1444270-1444524	LDFNMNDI_01408

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylformylglycinamidine synthase subunit PurQ	contig_1:1444526-1445197	LDFNMNDI_01409

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylformylglycinamidine synthase subunit PurL	contig_1:1445198-1447420	LDFNMNDI_01410

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Amidophosphoribosyltransferase	contig_1:1447405-1448844	LDFNMNDI_01411

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylformylglycinamidine cyclo-ligase	contig_1:1448867-1449919	LDFNMNDI_01412

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylglycinamide formyltransferase	contig_1:1449916-1450494	LDFNMNDI_01413

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional purine biosynthesis protein PurH	contig_1:1450491-1452026	LDFNMNDI_01414

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosylamine--glycine ligase	contig_1:1452042-1453316	LDFNMNDI_01415

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oxidoreductase YdhF	contig_1:1453439-1454353	LDFNMNDI_01416

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulator of RpoS	contig_1:c1456052-1454487	LDFNMNDI_01417

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adaptive-response sensory-kinase SasA	contig_1:c1457496-1456045	LDFNMNDI_01418

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC transporter periplasmic-binding protein YtfQ	contig_1:c1458262-1457510	LDFNMNDI_01419

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1458425-1458270	LDFNMNDI_01420

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multiple sugar-binding periplasmic receptor ChvE	contig_1:1458645-1459733	LDFNMNDI_01421

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xylose import ATP-binding protein XylG	contig_1:1459787-1461313	LDFNMNDI_01422

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xylose transport system permease protein XylH	contig_1:1461315-1462520	LDFNMNDI_01423

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GMP reductase	contig_1:1462777-1463754	LDFNMNDI_01424

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator NorG	contig_1:1463889-1465313	LDFNMNDI_01425

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate dehydrogenase E1 component subunit alpha	contig_1:1465773-1466882	LDFNMNDI_01426

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate dehydrogenase E1 component subunit beta	contig_1:1466885-1467862	LDFNMNDI_01427

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine cleavage system H protein	contig_1:1467887-1469530	LDFNMNDI_01428

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydrolipoyl dehydrogenase	contig_1:1469538-1470944	LDFNMNDI_01429

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1471106-1471708	LDFNMNDI_01430

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1471899-1472174	LDFNMNDI_01431

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3'(2'),5'-bisphosphate nucleotidase CysQ	contig_1:1472180-1472947	LDFNMNDI_01432

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTP-binding protein TypA/BipA	contig_1:1473114-1474943	LDFNMNDI_01433

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent DNA helicase RecQ	contig_1:1475203-1476975	LDFNMNDI_01434

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1477088-1477390	LDFNMNDI_01435

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative peptidoglycan glycosyltransferase FtsW	contig_1:1477393-1478556	LDFNMNDI_01436

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate carboxylase	contig_1:1478582-1482010	LDFNMNDI_01437

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1482031-1483155	LDFNMNDI_01438

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1483145-1483576	LDFNMNDI_01439

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1483566-1483904	LDFNMNDI_01440

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA small subunit methyltransferase D	contig_1:1484035-1484595	LDFNMNDI_01441

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphopantetheine adenylyltransferase	contig_1:1484592-1485083	LDFNMNDI_01442

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YlbL	contig_1:1485073-1486116	LDFNMNDI_01443

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1486448-1487125	LDFNMNDI_01444

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA-specific adenosine deaminase	contig_1:1487306-1487845	LDFNMNDI_01445

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ComE operon protein 3	contig_1:1487838-1490111	LDFNMNDI_01446

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YqeN	contig_1:1490148-1491194	LDFNMNDI_01447

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S20	contig_1:c1491533-1491279	LDFNMNDI_01448

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1492364-1491933	LDFNMNDI_01449

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1492575-1492447	LDFNMNDI_01450

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1493111-1492656	LDFNMNDI_01451

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc-transporting ATPase	contig_1:c1495174-1493246	LDFNMNDI_01452

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenyl-diphosphatase	contig_1:c1496204-1495371	LDFNMNDI_01453

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	contig_1:c1497098-1496394	LDFNMNDI_01454

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative metallo-hydrolase	contig_1:c1497749-1497123	LDFNMNDI_01455

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3'-5' exonuclease DinG	contig_1:1498075-1500450	LDFNMNDI_01456

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1500966-1500475	LDFNMNDI_01457

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1501139-1502071	LDFNMNDI_01458

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1502224-1502568	LDFNMNDI_01459

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1503253-1502678	LDFNMNDI_01460

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1503552-1505072	LDFNMNDI_01461

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1506026-1505403	LDFNMNDI_01463

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative universal stress protein	contig_1:1506361-1506795	LDFNMNDI_01464

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1506818-1507138	LDFNMNDI_01465

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1507281-1507472	LDFNMNDI_01466

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:1507657-1508616	LDFNMNDI_01467

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1508867-1508598	LDFNMNDI_01468

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1509025-1509288	LDFNMNDI_01469

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1509312-1509500	LDFNMNDI_01470

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1509780-1509592	LDFNMNDI_01471

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1509996-1510367	LDFNMNDI_01472

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1511061-1510633	LDFNMNDI_01474

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1511879-1511121	LDFNMNDI_01475

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase ISLgar5	contig_1:1511987-1513177	LDFNMNDI_01476

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1513519-1513716	LDFNMNDI_01477

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1513822-1514304	LDFNMNDI_01478

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1514956-1514360	LDFNMNDI_01479

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Di-/tripeptide transporter	contig_1:1515343-1516809	LDFNMNDI_01480

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent helicase/deoxyribonuclease subunit B	contig_1:1516990-1520517	LDFNMNDI_01481

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent helicase/nuclease subunit A	contig_1:1520514-1524236	LDFNMNDI_01482

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator YodB	contig_1:1524305-1524646	LDFNMNDI_01483

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phenylalanine--tRNA ligase alpha subunit	contig_1:1524958-1526001	LDFNMNDI_01484

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phenylalanine--tRNA ligase beta subunit	contig_1:1526006-1528426	LDFNMNDI_01485

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:1529057-1530016	LDFNMNDI_01486

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tryptophan--tRNA ligase 2	contig_1:c1531751-1530741	LDFNMNDI_01487

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamine transport ATP-binding protein GlnQ	contig_1:1532005-1532742	LDFNMNDI_01488

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC transporter glutamine-binding protein GlnH	contig_1:1532756-1533571	LDFNMNDI_01489

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glutamine ABC transporter permease protein GlnM	contig_1:1533585-1534232	LDFNMNDI_01490

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glutamine ABC transporter permease protein GlnP	contig_1:1534248-1534904	LDFNMNDI_01491

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamate racemase	contig_1:1535074-1535886	LDFNMNDI_01492

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease PH	contig_1:1535889-1537244	LDFNMNDI_01493

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative metallophosphoesterase MG207	contig_1:1537245-1537763	LDFNMNDI_01494

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1537870-1538370	LDFNMNDI_01495

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative MscS family protein YkuT	contig_1:c1539570-1538650	LDFNMNDI_01496

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Branched-chain-amino-acid aminotransferase	contig_1:1539735-1540748	LDFNMNDI_01497

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Enoyl-[acyl-carrier-protein] reductase [NADH] FabI	contig_1:c1541615-1540860	LDFNMNDI_01498

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	contig_1:1541834-1542274	LDFNMNDI_01499

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1543155-1542400	LDFNMNDI_01500

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1543344-1544435	LDFNMNDI_01501

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	contig_1:1544601-1545536	LDFNMNDI_01502

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glyceraldehyde-3-phosphate dehydrogenase	contig_1:c1546632-1545622	LDFNMNDI_01503

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTPase Obg	contig_1:1546912-1548225	LDFNMNDI_01504

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1548391-1548978	LDFNMNDI_01505

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease Z	contig_1:1549153-1550094	LDFNMNDI_01506

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase	contig_1:1550091-1550879	LDFNMNDI_01507

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1550889-1551323	LDFNMNDI_01508

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1551465-1553762	LDFNMNDI_01509

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adenine phosphoribosyltransferase	contig_1:1553776-1554288	LDFNMNDI_01510

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1554731-1554513	LDFNMNDI_01511

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	LexA repressor	contig_1:c1555533-1554910	LDFNMNDI_01512

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1555680-1555931	LDFNMNDI_01513

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transketolase	contig_1:1556033-1558030	LDFNMNDI_01514

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Autolysin	contig_1:1558277-1559170	LDFNMNDI_01515

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine synthase	contig_1:1559311-1560237	LDFNMNDI_01516

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peroxide operon regulator	contig_1:1560476-1560922	LDFNMNDI_01517

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH oxidase	contig_1:1561194-1562546	LDFNMNDI_01518

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1562778-1563065	LDFNMNDI_01519

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1563214-1563657	LDFNMNDI_01520

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tetracycline resistance protein, class C	contig_1:c1564847-1563660	LDFNMNDI_01521

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA replication protein DnaD	contig_1:1565115-1565813	LDFNMNDI_01522

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endonuclease III	contig_1:1565820-1566497	LDFNMNDI_01523

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Penicillin-binding protein 1A	contig_1:c1568892-1566514	LDFNMNDI_01524

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Holliday junction resolvase RecU	contig_1:c1569529-1568882	LDFNMNDI_01525

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1569593-1570132	LDFNMNDI_01526

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell cycle protein GpsB	contig_1:1570222-1570641	LDFNMNDI_01527

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA large subunit methyltransferase L	contig_1:1571188-1572354	LDFNMNDI_01528

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carboxypeptidase 1	contig_1:1572400-1573896	LDFNMNDI_01529

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YedJ	contig_1:1573977-1574660	LDFNMNDI_01530

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative pyridoxal phosphate-dependent acyltransferase	contig_1:1575157-1576353	LDFNMNDI_01531

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative epimerase/dehydratase	contig_1:1576455-1577408	LDFNMNDI_01532

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine exchanger SteT	contig_1:1577472-1578821	LDFNMNDI_01533

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-Ala-Xaa dipeptidase	contig_1:1578910-1580328	LDFNMNDI_01534

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	p-aminobenzoyl-glutamate transport protein	contig_1:1580565-1581320	LDFNMNDI_01535

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	p-aminobenzoyl-glutamate transport protein	contig_1:1581259-1581978	LDFNMNDI_01536

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1582341-1582018	LDFNMNDI_01537

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1582470-1583633	LDFNMNDI_01538

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DEAD-box ATP-dependent RNA helicase CshB	contig_1:1583703-1585052	LDFNMNDI_01539

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyltransferase	contig_1:c1585528-1585097	LDFNMNDI_01540

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alanine--tRNA ligase	contig_1:1585919-1588561	LDFNMNDI_01541

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pantothenate transporter PanT	contig_1:1588768-1589364	LDFNMNDI_01542

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ferrous-iron efflux pump FieF	contig_1:1589477-1590625	LDFNMNDI_01543

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	14.7 kDa ribonuclease H-like protein	contig_1:c1591076-1590672	LDFNMNDI_01544

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1591155-1591604	LDFNMNDI_01545

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock-like protein	contig_1:c1591938-1591708	LDFNMNDI_01546

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Formate--tetrahydrofolate ligase 1	contig_1:1592121-1593791	LDFNMNDI_01547

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1593965-1594351	LDFNMNDI_01548

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1594338-1595036	LDFNMNDI_01549

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoprotein signal peptidase	contig_1:1595041-1595505	LDFNMNDI_01550

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal large subunit pseudouridine synthase D	contig_1:1595502-1596413	LDFNMNDI_01551

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional protein pyrR	contig_1:1596646-1597185	LDFNMNDI_01552

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uracil permease	contig_1:1597199-1598482	LDFNMNDI_01553

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartate carbamoyltransferase	contig_1:1598495-1599421	LDFNMNDI_01554

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydroorotase	contig_1:1599440-1600720	LDFNMNDI_01555

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carbamoyl-phosphate synthase small chain	contig_1:1600725-1601801	LDFNMNDI_01556

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carbamoyl-phosphate synthase large chain	contig_1:1601806-1604991	LDFNMNDI_01557

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit	contig_1:1605045-1605821	LDFNMNDI_01558

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	contig_1:1605818-1606750	LDFNMNDI_01559

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Orotidine 5'-phosphate decarboxylase	contig_1:1606747-1608099	LDFNMNDI_01560

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIA component	contig_1:1608692-1609108	LDFNMNDI_01561

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIIAB component	contig_1:1609105-1609575	LDFNMNDI_01562

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system sorbose-specific EIIC component	contig_1:1609595-1610374	LDFNMNDI_01563

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system mannose-specific EIID component	contig_1:1610389-1611201	LDFNMNDI_01564

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fructosamine deglycase FrlB	contig_1:1611254-1612231	LDFNMNDI_01565

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein DagR	contig_1:1612337-1615033	LDFNMNDI_01566

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphorylated carbohydrates phosphatase	contig_1:1615045-1615680	LDFNMNDI_01567

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	5'-deoxynucleotidase YfbR	contig_1:1616073-1616714	LDFNMNDI_01568

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carbonic anhydrase	contig_1:1616745-1617449	LDFNMNDI_01569

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator HdfR	contig_1:1617446-1618348	LDFNMNDI_01570

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Rqc2 RqcH	contig_1:c1620236-1618530	LDFNMNDI_01571

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1620425-1621048	LDFNMNDI_01572

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1621498-1622547	LDFNMNDI_01573

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1622544-1623425	LDFNMNDI_01574

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bicarbonate transport ATP-binding protein CmpD	contig_1:1623428-1624198	LDFNMNDI_01575

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Shikimate dehydrogenase (NADP(+))	contig_1:1624476-1625330	LDFNMNDI_01576

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU	contig_1:1625508-1626671	LDFNMNDI_01577

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1626790-1627200	LDFNMNDI_01578

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA topoisomerase 3	contig_1:1627374-1629602	LDFNMNDI_01579

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1629730-1630047	LDFNMNDI_01580

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1630200-1630436	LDFNMNDI_01581

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1630433-1630831	LDFNMNDI_01582

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1631209-1631030	LDFNMNDI_01583

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:1631271-1632443	LDFNMNDI_01584

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-lactate dehydrogenase	contig_1:c1633811-1632864	LDFNMNDI_01585

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1634177-1633935	LDFNMNDI_01586

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1634535-1634203	LDFNMNDI_01587

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1634847-1634740	LDFNMNDI_01588

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIC component	contig_1:c1636841-1635468	LDFNMNDI_01589

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1637151-1636867	LDFNMNDI_01590

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1639168-1637153	LDFNMNDI_01591

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1639636-1639331	LDFNMNDI_01592

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative oxidoreductase YhhX	contig_1:c1640383-1639733	LDFNMNDI_01593

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1640465-1641379	LDFNMNDI_01594

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1642051-1641455	LDFNMNDI_01595

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative hemin import ATP-binding protein HrtA	contig_1:c1642796-1642110	LDFNMNDI_01596

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter permease	contig_1:c1643875-1642802	LDFNMNDI_01597

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Response regulator MprA	contig_1:1644096-1644770	LDFNMNDI_01598

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adaptive-response sensory-kinase SasA	contig_1:1644775-1646115	LDFNMNDI_01599

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Stress response protein YsnF	contig_1:c1647301-1646315	LDFNMNDI_01600

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1647921-1647544	LDFNMNDI_01601

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1648837-1647938	LDFNMNDI_01602

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyprenol monophosphomannose synthase	contig_1:c1649881-1649153	LDFNMNDI_01603

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerC	contig_1:1650093-1651124	LDFNMNDI_01604

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-succinylbenzoate--CoA ligase	contig_1:1651228-1652022	LDFNMNDI_01605

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-succinylbenzoate--CoA ligase	contig_1:1652119-1652760	LDFNMNDI_01606

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyridoxine kinase	contig_1:1653030-1653842	LDFNMNDI_01607

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiamine precursor transporter HmpT	contig_1:1653832-1654317	LDFNMNDI_01608

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1654339-1654506	LDFNMNDI_01609

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1654591-1654884	LDFNMNDI_01610

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligo-1,6-glucosidase	contig_1:c1656591-1654948	LDFNMNDI_01611

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1658963-1656720	LDFNMNDI_01612

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1659475-1658996	LDFNMNDI_01613

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein DegV	contig_1:c1660557-1659709	LDFNMNDI_01614

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipid II flippase MurJ	contig_1:c1662325-1660715	LDFNMNDI_01615

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1662886-1662569	LDFNMNDI_01616

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YgaZ	contig_1:c1663658-1662879	LDFNMNDI_01617

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc transporter ZitB	contig_1:c1664726-1663791	LDFNMNDI_01618

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1665193-1664801	LDFNMNDI_01619

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1665692-1665174	LDFNMNDI_01620

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1666913-1665840	LDFNMNDI_01621

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1667823-1666906	LDFNMNDI_01622

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1668228-1668037	LDFNMNDI_01623

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1668387-1669895	LDFNMNDI_01624

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleoside permease NupC	contig_1:1670282-1671463	LDFNMNDI_01625

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Guanylate kinase	contig_1:1671548-1672108	LDFNMNDI_01626

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1672815-1672303	LDFNMNDI_01627

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1673816-1672848	LDFNMNDI_01628

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1674511-1673822	LDFNMNDI_01629

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-cystine transport system permease protein YecS	contig_1:c1675294-1674635	LDFNMNDI_01630

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter extracellular-binding protein YckB	contig_1:c1676130-1675294	LDFNMNDI_01631

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-aminohexanoate-cyclic-dimer hydrolase	contig_1:c1677603-1676152	LDFNMNDI_01632

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydroorotate dehydrogenase A (fumarate)	contig_1:c1678682-1677738	LDFNMNDI_01633

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1679413-1678766	LDFNMNDI_01634

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cyclopropane-fatty-acyl-phospholipid synthase	contig_1:c1680812-1679646	LDFNMNDI_01635

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1681778-1680963	LDFNMNDI_01636

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Maltose/maltodextrin transport system permease protein MalG	contig_1:c1682642-1681791	LDFNMNDI_01637

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1683947-1682646	LDFNMNDI_01638

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Maltodextrin-binding protein MdxE	contig_1:c1685353-1684094	LDFNMNDI_01639

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Intracellular maltogenic amylase	contig_1:c1687222-1685456	LDFNMNDI_01640

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1687629-1688477	LDFNMNDI_01641

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1688581-1689015	LDFNMNDI_01642

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Organic hydroperoxide resistance protein OhrA	contig_1:1689192-1689602	LDFNMNDI_01643

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Organic hydroperoxide resistance transcriptional regulator	contig_1:1689659-1690099	LDFNMNDI_01644

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1690249-1691271	LDFNMNDI_01645

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1692652-1691807	LDFNMNDI_01646

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1692800-1694353	LDFNMNDI_01647

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mannonate dehydratase	contig_1:c1695549-1694464	LDFNMNDI_01648

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyol:NADP oxidoreductase	contig_1:c1697186-1695549	LDFNMNDI_01649

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor RspR	contig_1:1697370-1698029	LDFNMNDI_01650

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alkyl hydroperoxide reductase C	contig_1:1698174-1698737	LDFNMNDI_01651

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH dehydrogenase	contig_1:1698747-1700276	LDFNMNDI_01652

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1700555-1700905	LDFNMNDI_01653

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1701004-1701531	LDFNMNDI_01654

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Na(+)/H(+) antiporter	contig_1:1701685-1702836	LDFNMNDI_01655

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-lactam-inducible penicillin-binding protein	contig_1:c1704969-1702933	LDFNMNDI_01656

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein MsrR	contig_1:c1705984-1705100	LDFNMNDI_01657

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative peptidoglycan glycosyltransferase FtsW	contig_1:c1707240-1706077	LDFNMNDI_01658

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1707961-1707755	LDFNMNDI_01659

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1708591-1707977	LDFNMNDI_01660

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative N-acetylmannosamine-6-phosphate 2-epimerase	contig_1:c1709422-1708739	LDFNMNDI_01661

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1709995-1709537	LDFNMNDI_01662

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	1-deoxy-D-xylulose-5-phosphate synthase	contig_1:c1711843-1710080	LDFNMNDI_01663

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1713536-1712076	LDFNMNDI_01664

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutaminase	contig_1:c1714669-1713743	LDFNMNDI_01665

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamate/gamma-aminobutyrate antiporter	contig_1:c1716119-1714692	LDFNMNDI_01666

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ammonia channel	contig_1:c1717364-1716150	LDFNMNDI_01667

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1717936-1717694	LDFNMNDI_01668

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Stress response regulator gls24	contig_1:c1718525-1717968	LDFNMNDI_01669

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1718726-1718538	LDFNMNDI_01670

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1719305-1718739	LDFNMNDI_01671

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1719723-1719896	LDFNMNDI_01672

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1720128-1719973	LDFNMNDI_01673

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Accessory gene regulator protein B	contig_1:c1720706-1720125	LDFNMNDI_01674

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Accessory gene regulator protein A	contig_1:c1721613-1720873	LDFNMNDI_01675

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1722898-1721621	LDFNMNDI_01676

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1723209-1723682	LDFNMNDI_01677

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1723691-1723924	LDFNMNDI_01678

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative trans-acting regulator	contig_1:c1725509-1724046	LDFNMNDI_01679

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1728644-1725678	LDFNMNDI_01680

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1729898-1728690	LDFNMNDI_01681

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1730143-1729877	LDFNMNDI_01682

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1730753-1731124	LDFNMNDI_01683

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1731654-1731412	LDFNMNDI_01684

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1732591-1731686	LDFNMNDI_01685

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1732792-1732604	LDFNMNDI_01686

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1733367-1732804	LDFNMNDI_01687

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative oxidoreductase YghA	contig_1:c1734298-1733405	LDFNMNDI_01688

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc transport protein ZntB	contig_1:c1735316-1734378	LDFNMNDI_01689

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1735700-1735350	LDFNMNDI_01690

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	General stress protein A	contig_1:c1736635-1735733	LDFNMNDI_01691

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	General stress protein A	contig_1:c1737485-1736628	LDFNMNDI_01692

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sugar phosphatase YidA	contig_1:1737819-1738628	LDFNMNDI_01693

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1738668-1739171	LDFNMNDI_01694

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1739949-1740254	LDFNMNDI_01696

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1740411-1740665	LDFNMNDI_01697

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1740735-1740980	LDFNMNDI_01698

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1741058-1741423	LDFNMNDI_01699

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1742233-1741646	LDFNMNDI_01700

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock protein 1	contig_1:c1742958-1742758	LDFNMNDI_01701

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1743692-1743201	LDFNMNDI_01702

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1743855-1744004	LDFNMNDI_01703

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:c1745407-1744643	LDFNMNDI_01704

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1745915-1746121	LDFNMNDI_01705

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl esterase	contig_1:c1747367-1746366	LDFNMNDI_01706

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1749276-1747372	LDFNMNDI_01707

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Streptothricin hydrolase	contig_1:c1749960-1749454	LDFNMNDI_01708

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein Spx	contig_1:1750116-1750727	LDFNMNDI_01709

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1751641-1750694	LDFNMNDI_01710

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1752674-1752225	LDFNMNDI_01711

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Foldase protein PrsA	contig_1:1752859-1753590	LDFNMNDI_01712

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1754822-1754037	LDFNMNDI_01713

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1755432-1755647	LDFNMNDI_01714

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1755785-1756270	LDFNMNDI_01715

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1756989-1756351	LDFNMNDI_01716

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1757181-1757594	LDFNMNDI_01717

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1758822-1759613	LDFNMNDI_01718

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1759723-1760115	LDFNMNDI_01719

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1761119-1760196	LDFNMNDI_01720

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein/nucleic acid deglycase 1	contig_1:c1761797-1761120	LDFNMNDI_01721

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1762128-1761775	LDFNMNDI_01722

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock-like protein CspLA	contig_1:c1762613-1762416	LDFNMNDI_01723

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1763049-1762906	LDFNMNDI_01724

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1763721-1764023	LDFNMNDI_01725

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1764464-1764204	LDFNMNDI_01726

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor 4	contig_1:c1767182-1765347	LDFNMNDI_01727

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetyltransferase Eis	contig_1:1767329-1768549	LDFNMNDI_01728

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1768569-1769063	LDFNMNDI_01729

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1769056-1769727	LDFNMNDI_01730

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chaperone protein ClpB	contig_1:c1772485-1769876	LDFNMNDI_01731

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1773781-1772735	LDFNMNDI_01732

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1774064-1773792	LDFNMNDI_01733

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diacylglycerol kinase	contig_1:c1775007-1774099	LDFNMNDI_01734

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptidase T	contig_1:c1776370-1775138	LDFNMNDI_01735

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTP cyclohydrolase 1 type 2	contig_1:c1777505-1776384	LDFNMNDI_01736

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA (adenine(22)-N(1))-methyltransferase	contig_1:c1778203-1777502	LDFNMNDI_01737

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1778786-1778346	LDFNMNDI_01738

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Primosomal protein DnaI	contig_1:c1779841-1778915	LDFNMNDI_01739

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Replication initiation and membrane attachment protein	contig_1:c1781214-1779841	LDFNMNDI_01740

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional repressor NrdR	contig_1:c1781740-1781237	LDFNMNDI_01741

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1782386-1782054	LDFNMNDI_01742

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dephospho-CoA kinase	contig_1:c1783067-1782438	LDFNMNDI_01743

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Formamidopyrimidine-DNA glycosylase	contig_1:c1783867-1783031	LDFNMNDI_01744

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase I	contig_1:c1786557-1783912	LDFNMNDI_01745

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YbhL	contig_1:c1787366-1786683	LDFNMNDI_01746

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1787844-1787359	LDFNMNDI_01747

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylmuramate--L-alanine ligase	contig_1:c1789485-1788151	LDFNMNDI_01748

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein YdcF	contig_1:c1790377-1789616	LDFNMNDI_01749

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein SprT-like protein	contig_1:c1790875-1790405	LDFNMNDI_01750

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein YhgF	contig_1:c1793075-1790895	LDFNMNDI_01751

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Serine/threonine-protein phosphatase 1	contig_1:c1793950-1793219	LDFNMNDI_01752

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1794960-1794019	LDFNMNDI_01753

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1795505-1795137	LDFNMNDI_01754

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-cystine uptake protein TcyP	contig_1:c1797167-1795776	LDFNMNDI_01755

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1797765-1797379	LDFNMNDI_01756

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoglycolate phosphatase	contig_1:c1798444-1797821	LDFNMNDI_01757

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	contig_1:c1799173-1798505	LDFNMNDI_01758

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1799622-1799185	LDFNMNDI_01759

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1800355-1799684	LDFNMNDI_01760

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1800938-1800540	LDFNMNDI_01761

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Na(+), Li(+), K(+)/H(+) antiporter subunit B	contig_1:c1801708-1800935	LDFNMNDI_01762

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Na(+), Li(+), K(+)/H(+) antiporter subunit B	contig_1:c1802388-1801705	LDFNMNDI_01763

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose transport system permease protein LacG	contig_1:c1803443-1802556	LDFNMNDI_01764

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose transport system permease protein LacF	contig_1:c1804309-1803440	LDFNMNDI_01765

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose-binding protein	contig_1:c1805732-1804446	LDFNMNDI_01766

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1805947-1805813	LDFNMNDI_01767

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional activator RhaR	contig_1:1806006-1807514	LDFNMNDI_01768

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1807511-1809238	LDFNMNDI_01769

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional chorismate mutase/prephenate dehydratase	contig_1:c1810132-1809308	LDFNMNDI_01770

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Shikimate kinase 2	contig_1:c1810638-1810129	LDFNMNDI_01771

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-phosphoshikimate 1-carboxyvinyltransferase	contig_1:c1811926-1810631	LDFNMNDI_01772

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1813030-1811939	LDFNMNDI_01773

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chorismate synthase	contig_1:c1814213-1813047	LDFNMNDI_01774

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-dehydroquinate synthase	contig_1:c1815279-1814215	LDFNMNDI_01775

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phospho-2-dehydro-3-deoxyheptonate aldolase	contig_1:c1816334-1815312	LDFNMNDI_01776

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-galactosidase small subunit	contig_1:c1817967-1816993	LDFNMNDI_01777

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-galactosidase large subunit	contig_1:c1819831-1817948	LDFNMNDI_01778

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alpha-galactosidase Mel36A	contig_1:c1822074-1819849	LDFNMNDI_01779

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor MelR	contig_1:1822188-1823222	LDFNMNDI_01780

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl esterase	contig_1:c1824101-1823289	LDFNMNDI_01781

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1824300-1824079	LDFNMNDI_01782

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	contig_1:c1825514-1824378	LDFNMNDI_01783

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1826722-1825961	LDFNMNDI_01784

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:1826821-1828542	LDFNMNDI_01785

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:1828557-1830341	LDFNMNDI_01786

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1831041-1830913	LDFNMNDI_01787

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative RNA methyltransferase	contig_1:c1832417-1831044	LDFNMNDI_01788

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diacylglycerol kinase	contig_1:c1833583-1832528	LDFNMNDI_01789

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	contig_1:c1835023-1833593	LDFNMNDI_01790

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamyl-tRNA(Gln) amidotransferase subunit A	contig_1:c1836492-1835020	LDFNMNDI_01791

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamyl-tRNA(Gln) amidotransferase subunit C	contig_1:c1836797-1836492	LDFNMNDI_01792

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA ligase	contig_1:c1838939-1836903	LDFNMNDI_01793

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent DNA helicase PcrA	contig_1:c1841193-1838956	LDFNMNDI_01794

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	H(+)/Cl(-) exchange transporter ClcA	contig_1:1841348-1842907	LDFNMNDI_01795

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIABC component	contig_1:c1844944-1843013	LDFNMNDI_01796

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose-6-phosphate kinase	contig_1:c1845876-1844962	LDFNMNDI_01797

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor GlcR	contig_1:c1846625-1845873	LDFNMNDI_01798

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1846992-1846774	LDFNMNDI_01799

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1848331-1847003	LDFNMNDI_01800

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1848468-1848623	LDFNMNDI_01801

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative GTP-binding protein EngB	contig_1:c1849288-1848701	LDFNMNDI_01802

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent Clp protease ATP-binding subunit ClpX	contig_1:c1850621-1849371	LDFNMNDI_01803

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Trigger factor	contig_1:c1852126-1850837	LDFNMNDI_01804

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1853212-1852280	LDFNMNDI_01805

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1854025-1853366	LDFNMNDI_01806

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative signal peptide peptidase SppA	contig_1:c1855053-1854028	LDFNMNDI_01807

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1855356-1855066	LDFNMNDI_01808

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	contig_1:1855764-1857569	LDFNMNDI_01809

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1858553-1857723	LDFNMNDI_01810

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1858703-1858927	LDFNMNDI_01811

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoglucosamine mutase	contig_1:c1860620-1859265	LDFNMNDI_01812

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1861816-1860644	LDFNMNDI_01813

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cyclic di-AMP synthase CdaA	contig_1:c1862700-1861813	LDFNMNDI_01814

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyruvate:ferredoxin oxidoreductase	contig_1:c1866581-1862889	LDFNMNDI_01815

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1866772-1867293	LDFNMNDI_01816

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein A	contig_1:c1869643-1867412	LDFNMNDI_01817

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative cell division protein WhiA	contig_1:c1870743-1869808	LDFNMNDI_01818

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative gluconeogenesis factor	contig_1:c1871775-1870777	LDFNMNDI_01819

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleotide-binding protein YvcJ	contig_1:c1872656-1871772	LDFNMNDI_01820

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartate racemase	contig_1:c1873524-1872793	LDFNMNDI_01821

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-aspartate ligase	contig_1:c1874793-1873528	LDFNMNDI_01822

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein A	contig_1:c1877872-1875056	LDFNMNDI_01823

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein B	contig_1:c1879876-1877882	LDFNMNDI_01824

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane-bound lytic murein transglycosylase F	contig_1:1880135-1881637	LDFNMNDI_01825

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine transport ATP-binding protein ArtM	contig_1:1881639-1882376	LDFNMNDI_01826

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1883441-1882503	LDFNMNDI_01827

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sulfate/thiosulfate import ATP-binding protein CysA	contig_1:c1884070-1883444	LDFNMNDI_01828

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chaperone protein DnaJ	contig_1:c1885594-1884428	LDFNMNDI_01829

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chaperone protein DnaK	contig_1:c1887571-1885745	LDFNMNDI_01830

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein GrpE	contig_1:c1888185-1887622	LDFNMNDI_01831

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Heat-inducible transcription repressor HrcA	contig_1:c1889322-1888279	LDFNMNDI_01832

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Heme chaperone HemW	contig_1:c1890721-1889555	LDFNMNDI_01833

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1890964-1890737	LDFNMNDI_01834

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Toxin RelG	contig_1:c1891482-1891216	LDFNMNDI_01835

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1891709-1891479	LDFNMNDI_01836

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1892159-1891917	LDFNMNDI_01837

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1892520-1892185	LDFNMNDI_01838

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1892838-1892533	LDFNMNDI_01839

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protease YdeA	contig_1:1893626-1894216	LDFNMNDI_01840

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:c1895511-1894675	LDFNMNDI_01841

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:c1895837-1895547	LDFNMNDI_01842

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1896238-1895906	LDFNMNDI_01843

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GlvR	contig_1:c1897006-1896239	LDFNMNDI_01844

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Maltose-6'-phosphate glucosidase MalH	contig_1:c1898422-1897091	LDFNMNDI_01845

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system maltose-specific EIICB component	contig_1:c1898822-1898466	LDFNMNDI_01846

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system maltose-specific EIICB component	contig_1:c1900047-1898782	LDFNMNDI_01847

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1900315-1901028	LDFNMNDI_01848

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1902084-1901071	LDFNMNDI_01849

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Microcin C7 self-immunity protein MccF	contig_1:c1903353-1902343	LDFNMNDI_01850

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Prolyl-tRNA editing protein ProX	contig_1:c1903872-1903390	LDFNMNDI_01851

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Intracellular iron chaperone frataxin	contig_1:1904022-1904390	LDFNMNDI_01852

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1904851-1905303	LDFNMNDI_01853

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucose uptake protein GlcU	contig_1:c1906234-1905383	LDFNMNDI_01854

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucose 1-dehydrogenase 4	contig_1:c1907032-1906247	LDFNMNDI_01855

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bifunctional riboflavin kinase/FMN adenylyltransferase	contig_1:c1908366-1907425	LDFNMNDI_01856

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA pseudouridine synthase B	contig_1:c1909293-1908370	LDFNMNDI_01857

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xylulose-5-phosphate phosphoketolase	contig_1:c1912025-1909662	LDFNMNDI_01858

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome-binding factor A	contig_1:c1912819-1912472	LDFNMNDI_01859

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Translation initiation factor IF-2	contig_1:c1915146-1912846	LDFNMNDI_01860

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ribosomal protein YlxQ	contig_1:c1915470-1915159	LDFNMNDI_01861

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1915760-1915467	LDFNMNDI_01862

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription termination/antitermination protein NusA	contig_1:c1916957-1915782	LDFNMNDI_01863

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome maturation factor RimP	contig_1:c1917453-1916980	LDFNMNDI_01864

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase III PolC-type	contig_1:c1921949-1917597	LDFNMNDI_01865

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Proline--tRNA ligase	contig_1:c1923870-1922161	LDFNMNDI_01866

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulator of sigma-W protease RasP	contig_1:c1925206-1923938	LDFNMNDI_01867

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1926167-1925367	LDFNMNDI_01868

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)	contig_1:c1926976-1926164	LDFNMNDI_01869

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome-recycling factor	contig_1:c1927728-1927171	LDFNMNDI_01870

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uridylate kinase	contig_1:c1928453-1927731	LDFNMNDI_01871

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor Ts	contig_1:c1929470-1928589	LDFNMNDI_01872

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S2	contig_1:c1930349-1929567	LDFNMNDI_01873

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine repressor	contig_1:1930708-1931187	LDFNMNDI_01874

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-aminoethylphosphonate--pyruvate transaminase	contig_1:1931407-1932498	LDFNMNDI_01875

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphonoacetaldehyde hydrolase	contig_1:1932491-1933276	LDFNMNDI_01876

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine--tRNA ligase	contig_1:c1935146-1933455	LDFNMNDI_01877

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carbamate kinase 1	contig_1:c1936517-1935570	LDFNMNDI_01878

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ornithine carbamoyltransferase, catabolic	contig_1:c1937651-1936632	LDFNMNDI_01879

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine deiminase	contig_1:c1938971-1937742	LDFNMNDI_01880

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1939432-1940133	LDFNMNDI_01881

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine-protein kinase YwqD	contig_1:c1940884-1940195	LDFNMNDI_01882

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA N6-adenosine threonylcarbamoyltransferase	contig_1:c1942277-1941261	LDFNMNDI_01883

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1942738-1942274	LDFNMNDI_01884

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1943287-1942745	LDFNMNDI_01885

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA threonylcarbamoyladenosine biosynthesis protein TsaB	contig_1:c1944095-1943271	LDFNMNDI_01886

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor MelR	contig_1:c1945167-1944187	LDFNMNDI_01887

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Galactose-1-phosphate uridylyltransferase	contig_1:c1946675-1945191	LDFNMNDI_01888

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-glucose 4-epimerase	contig_1:c1947676-1946687	LDFNMNDI_01889

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1947923-1948090	LDFNMNDI_01890

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1949964-1948153	LDFNMNDI_01891

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1950326-1949961	LDFNMNDI_01892

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YibN	contig_1:c1950886-1950491	LDFNMNDI_01893

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucokinase	contig_1:c1951866-1950904	LDFNMNDI_01894

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YqgQ	contig_1:c1952078-1951866	LDFNMNDI_01895

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Rhomboid protease GluP	contig_1:c1952797-1952099	LDFNMNDI_01896

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YqgN	contig_1:c1953359-1952817	LDFNMNDI_01897

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Iron-uptake system permease protein FeuC	contig_1:c1954497-1953493	LDFNMNDI_01898

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Iron-uptake system permease protein FeuB	contig_1:c1955483-1954494	LDFNMNDI_01899

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ferric enterobactin transport ATP-binding protein FepC	contig_1:c1956286-1955480	LDFNMNDI_01900

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative siderophore-binding lipoprotein YfiY	contig_1:1956452-1957408	LDFNMNDI_01901

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dihydrofolate reductase	contig_1:c1957999-1957481	LDFNMNDI_01902

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L33 1	contig_1:c1958236-1958087	LDFNMNDI_01903

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1958464-1958910	LDFNMNDI_01904

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Asparagine synthetase [glutamine-hydrolyzing] 1	contig_1:c1960886-1958991	LDFNMNDI_01905

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1961343-1961206	LDFNMNDI_01906

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1962335-1961769	LDFNMNDI_01908

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1962591-1963922	LDFNMNDI_01909

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1963888-1964241	LDFNMNDI_01910

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1964750-1964331	LDFNMNDI_01911

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1965095-1964751	LDFNMNDI_01912

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1965465-1966061	LDFNMNDI_01913

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1966188-1967987	LDFNMNDI_01914

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1968196-1968086	LDFNMNDI_01915

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1968477-1968265	LDFNMNDI_01916

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1968925-1969074	LDFNMNDI_01917

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1969342-1969728	LDFNMNDI_01918

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1970466-1970768	LDFNMNDI_01919

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Choloylglycine hydrolase	contig_1:c1972344-1971370	LDFNMNDI_01920

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1972507-1972764	LDFNMNDI_01921

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1973412-1972996	LDFNMNDI_01922

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:c1974561-1973725	LDFNMNDI_01923

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:c1974887-1974597	LDFNMNDI_01924

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1975206-1975021	LDFNMNDI_01925

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1975453-1975223	LDFNMNDI_01926

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1976004-1975450	LDFNMNDI_01927

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1976220-1976068	LDFNMNDI_01928

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1976467-1976309	LDFNMNDI_01929

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1976631-1977011	LDFNMNDI_01930

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1977018-1977446	LDFNMNDI_01931

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1977511-1978179	LDFNMNDI_01932

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1978336-1979109	LDFNMNDI_01933

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerC	contig_1:1979106-1979558	LDFNMNDI_01934

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glucose-6-phosphate isomerase	contig_1:c1981007-1979661	LDFNMNDI_01935

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADP-specific glutamate dehydrogenase	contig_1:c1982468-1981119	LDFNMNDI_01936

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-dehydro-bile acid delta(4,6)-reductase	contig_1:1982585-1983838	LDFNMNDI_01937

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	contig_1:c1984394-1983909	LDFNMNDI_01938

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3-dehydroquinate dehydratase	contig_1:c1985175-1984417	LDFNMNDI_01939

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosomal RNA large subunit methyltransferase I	contig_1:c1986369-1985191	LDFNMNDI_01940

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoteichoic acid synthase 1	contig_1:1986598-1988718	LDFNMNDI_01941

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1988890-1989615	LDFNMNDI_01942

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1989605-1990114	LDFNMNDI_01943

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase RcsC	contig_1:c1991635-1990187	LDFNMNDI_01944

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulatory protein SrrA	contig_1:c1992351-1991635	LDFNMNDI_01945

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1992682-1992332	LDFNMNDI_01946

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative phosphatase	contig_1:1992826-1993599	LDFNMNDI_01947

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:1994367-1994669	LDFNMNDI_01949

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock-like protein CspLA	contig_1:c1995881-1995684	LDFNMNDI_01950

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1996994-1996302	LDFNMNDI_01951

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1998141-1997122	LDFNMNDI_01952

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1998349-1998152	LDFNMNDI_01953

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c1998607-1998365	LDFNMNDI_01954

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2000905-1998689	LDFNMNDI_01955

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2003182-2000921	LDFNMNDI_01956

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2003929-2003192	LDFNMNDI_01957

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:c2007301-2003981	LDFNMNDI_01958

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2007865-2007503	LDFNMNDI_01959

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2008492-2007887	LDFNMNDI_01960

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2008908-2008504	LDFNMNDI_01961

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2009302-2008901	LDFNMNDI_01962

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2009645-2009292	LDFNMNDI_01963

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2009946-2009635	LDFNMNDI_01964

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2010818-2009943	LDFNMNDI_01965

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2011988-2010828	LDFNMNDI_01966

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP-dependent Clp protease proteolytic subunit	contig_1:c2012674-2011988	LDFNMNDI_01967

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2013815-2012637	LDFNMNDI_01968

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2015529-2013835	LDFNMNDI_01969

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2015821-2015507	LDFNMNDI_01970

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2016205-2015924	LDFNMNDI_01971

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2016554-2016210	LDFNMNDI_01972

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2016803-2016636	LDFNMNDI_01973

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2017154-2017366	LDFNMNDI_01974

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2017578-2017336	LDFNMNDI_01975

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2017817-2017602	LDFNMNDI_01976

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2018489-2018076	LDFNMNDI_01977

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2019511-2019161	LDFNMNDI_01978

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2019825-2019508	LDFNMNDI_01979

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2020115-2019825	LDFNMNDI_01980

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2020414-2020109	LDFNMNDI_01981

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2020578-2020417	LDFNMNDI_01982

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2020952-2020593	LDFNMNDI_01983

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2021800-2020949	LDFNMNDI_01984

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2022645-2021818	LDFNMNDI_01985

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2023338-2022652	LDFNMNDI_01986

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2024015-2023344	LDFNMNDI_01987

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2024349-2024008	LDFNMNDI_01988

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2024496-2025155	LDFNMNDI_01989

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2025400-2025152	LDFNMNDI_01990

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2025574-2025404	LDFNMNDI_01991

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2025814-2025587	LDFNMNDI_01992

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2026032-2025829	LDFNMNDI_01993

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2026793-2026047	LDFNMNDI_01994

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2027074-2026841	LDFNMNDI_01995

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	LexA repressor	contig_1:2027216-2027977	LDFNMNDI_01996

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2028052-2028258	LDFNMNDI_01997

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2028367-2029020	LDFNMNDI_01998

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2029158-2029619	LDFNMNDI_01999

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2029653-2030288	LDFNMNDI_02000

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2030401-2031036	LDFNMNDI_02001

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2031163-2031029	LDFNMNDI_02002

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine recombinase XerC	contig_1:2031333-2032475	LDFNMNDI_02003

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:2033356-2034528	LDFNMNDI_02004

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2034729-2035265	LDFNMNDI_02005

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2035937-2035677	LDFNMNDI_02006

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2036620-2036123	LDFNMNDI_02007

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alpha-acetolactate decarboxylase	contig_1:c2037459-2036749	LDFNMNDI_02008

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetolactate synthase	contig_1:c2039136-2037472	LDFNMNDI_02009

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2040004-2039342	LDFNMNDI_02010

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraQ	contig_1:c2040884-2039985	LDFNMNDI_02011

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose transport system permease protein LacF	contig_1:c2041791-2040895	LDFNMNDI_02012

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diacetylchitobiose binding protein DasA	contig_1:c2043103-2041844	LDFNMNDI_02013

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Unsaturated chondroitin disaccharide hydrolase	contig_1:c2044211-2043132	LDFNMNDI_02014

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2044284-2044189	LDFNMNDI_02015

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2044645-2044274	LDFNMNDI_02016

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative metabolite transport protein YjhB	contig_1:2044842-2046035	LDFNMNDI_02017

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2046623-2046201	LDFNMNDI_02018

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2046993-2047745	LDFNMNDI_02019

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2047910-2047713	LDFNMNDI_02020

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2049079-2047907	LDFNMNDI_02021

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fimbrial subunit type 1	contig_1:c2050963-2049533	LDFNMNDI_02022

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2052252-2050960	LDFNMNDI_02023

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2052462-2052262	LDFNMNDI_02024

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2053004-2052459	LDFNMNDI_02025

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2054780-2053146	LDFNMNDI_02026

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:2055019-2056191	LDFNMNDI_02027

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2056461-2057117	LDFNMNDI_02028

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2057498-2057205	LDFNMNDI_02029

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	50S ribosomal protein L19	contig_1:c2058102-2057755	LDFNMNDI_02030

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA (guanine-N(1)-)-methyltransferase	contig_1:c2058998-2058246	LDFNMNDI_02031

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome maturation factor RimM	contig_1:c2059512-2058988	LDFNMNDI_02032

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2060455-2059664	LDFNMNDI_02033

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2060830-2060579	LDFNMNDI_02034

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S16	contig_1:c2061117-2060842	LDFNMNDI_02035

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2062009-2061239	LDFNMNDI_02036

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:c2062908-2062006	LDFNMNDI_02037

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2063108-2062908	LDFNMNDI_02038

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2064222-2063110	LDFNMNDI_02039

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Quinone reductase	contig_1:2064402-2064956	LDFNMNDI_02040

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS1595 family transposase ISCac2	contig_1:c2065687-2065166	LDFNMNDI_02041

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-3-methyladenine glycosylase 1	contig_1:c2066278-2065706	LDFNMNDI_02042

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Signal recognition particle protein	contig_1:c2067808-2066390	LDFNMNDI_02043

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2068167-2067829	LDFNMNDI_02044

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2068630-2068127	LDFNMNDI_02045

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alkaline phosphatase synthesis transcriptional regulatory protein PhoP	contig_1:2068761-2069465	LDFNMNDI_02046

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alkaline phosphatase synthesis sensor protein PhoR	contig_1:2069462-2071201	LDFNMNDI_02047

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dipeptidase A	contig_1:c2071904-2071296	LDFNMNDI_02048

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Dipeptidase	contig_1:c2072765-2071929	LDFNMNDI_02049

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Calcium-transporting ATPase CtpE	contig_1:c2075418-2072950	LDFNMNDI_02050

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate-binding protein PstS 1	contig_1:c2076559-2075669	LDFNMNDI_02051

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2077236-2076754	LDFNMNDI_02052

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2077443-2077808	LDFNMNDI_02053

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2078448-2077873	LDFNMNDI_02054

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2079814-2078522	LDFNMNDI_02055

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2080072-2081016	LDFNMNDI_02056

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2081020-2082090	LDFNMNDI_02057

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2082080-2084251	LDFNMNDI_02058

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Copper-exporting P-type ATPase B	contig_1:c2086472-2084364	LDFNMNDI_02059

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative copper-importing P-type ATPase A	contig_1:c2088678-2086492	LDFNMNDI_02060

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Copper chaperone CopZ	contig_1:c2088887-2088678	LDFNMNDI_02061

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional repressor CopY	contig_1:c2089340-2088900	LDFNMNDI_02062

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Shikimate kinase	contig_1:c2089953-2089414	LDFNMNDI_02063

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane transporter YcaM	contig_1:c2091528-2090062	LDFNMNDI_02064

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cadmium, zinc and cobalt-transporting ATPase	contig_1:c2093920-2091839	LDFNMNDI_02065

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Kynurenine formamidase	contig_1:c2094845-2094063	LDFNMNDI_02066

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane protein YccF	contig_1:c2095547-2095188	LDFNMNDI_02067

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2095915-2095577	LDFNMNDI_02068

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetylxylan esterase	contig_1:c2096589-2095915	LDFNMNDI_02069

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2097144-2096758	LDFNMNDI_02070

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Asparagine--tRNA ligase	contig_1:c2098846-2097548	LDFNMNDI_02071

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Asparagine--oxo-acid transaminase	contig_1:c2100076-2098886	LDFNMNDI_02072

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2100600-2100097	LDFNMNDI_02073

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3'-5' exonuclease DinG	contig_1:c2103460-2100671	LDFNMNDI_02074

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cold shock-like protein CspLA	contig_1:c2103807-2103607	LDFNMNDI_02075

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2104580-2104260	LDFNMNDI_02076

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2105989-2104871	LDFNMNDI_02077

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2106222-2106344	LDFNMNDI_02078

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-alanyl-D-alanine carboxypeptidase DacA	contig_1:2106462-2107769	LDFNMNDI_02079

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2107889-2109088	LDFNMNDI_02080

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chloride/fluoride channel protein	contig_1:c2110383-2109115	LDFNMNDI_02081

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2111194-2110547	LDFNMNDI_02082

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease Y	contig_1:c2112106-2111603	LDFNMNDI_02083

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative TrmH family tRNA/rRNA methyltransferase	contig_1:c2112993-2112229	LDFNMNDI_02084

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acylphosphatase	contig_1:2113101-2113376	LDFNMNDI_02085

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Membrane protein insertase YidC	contig_1:2113921-2114871	LDFNMNDI_02086

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose 1,6-diphosphate aldolase 2	contig_1:c2116024-2115050	LDFNMNDI_02087

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2116479-2116021	LDFNMNDI_02088

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIABC component	contig_1:c2117939-2116476	LDFNMNDI_02089

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tagatose-6-phosphate kinase	contig_1:c2118871-2117921	LDFNMNDI_02090

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GlvR	contig_1:2119014-2119763	LDFNMNDI_02091

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative O-antigen transporter	contig_1:c2121479-2120067	LDFNMNDI_02092

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-glucose 6-dehydrogenase	contig_1:c2122649-2121483	LDFNMNDI_02093

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative glycosyltransferase EpsE	contig_1:c2123441-2122653	LDFNMNDI_02094

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:2123618-2124790	LDFNMNDI_02095

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2125937-2124954	LDFNMNDI_02096

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_1:2125955-2127127	LDFNMNDI_02097

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2127539-2127165	LDFNMNDI_02098

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative glycosyltransferase EpsD	contig_1:c2128713-2127559	LDFNMNDI_02099

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2129562-2128726	LDFNMNDI_02100

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase	contig_1:c2130173-2129559	LDFNMNDI_02101

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase	contig_1:c2132001-2130184	LDFNMNDI_02102

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine-protein phosphatase YwqE	contig_1:c2132778-2132014	LDFNMNDI_02103

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine-protein kinase YwqD	contig_1:c2133504-2132806	LDFNMNDI_02104

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative capsular polysaccharide biosynthesis protein YwqC	contig_1:c2134296-2133517	LDFNMNDI_02105

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU	contig_1:c2135256-2134312	LDFNMNDI_02106

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2136076-2135297	LDFNMNDI_02107

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2136301-2136206	LDFNMNDI_02108

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine--tRNA ligase beta subunit	contig_1:c2138536-2136461	LDFNMNDI_02109

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine--tRNA ligase alpha subunit	contig_1:c2139455-2138538	LDFNMNDI_02110

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA repair protein RecO	contig_1:c2140653-2139841	LDFNMNDI_02111

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	GTPase Era	contig_1:c2141695-2140796	LDFNMNDI_02112

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Undecaprenol kinase	contig_1:c2142111-2141710	LDFNMNDI_02113

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endoribonuclease YbeY	contig_1:c2142550-2142089	LDFNMNDI_02114

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cyclic-di-AMP phosphodiesterase PgpH	contig_1:c2144786-2142594	LDFNMNDI_02115

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PhoH-like protein	contig_1:c2145781-2144810	LDFNMNDI_02116

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Branched-chain amino acid transport system 2 carrier protein	contig_1:2146489-2147868	LDFNMNDI_02117

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YqeY	contig_1:c2148470-2148024	LDFNMNDI_02118

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	30S ribosomal protein S21	contig_1:c2148673-2148497	LDFNMNDI_02119

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Zinc-specific metallo-regulatory protein	contig_1:c2149263-2148835	LDFNMNDI_02120

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative pyruvate, phosphate dikinase regulatory protein	contig_1:2149355-2150215	LDFNMNDI_02121

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor CzrA	contig_1:c2150592-2150299	LDFNMNDI_02122

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoglucomutase	contig_1:c2152392-2150665	LDFNMNDI_02123

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thioredoxin reductase	contig_1:c2153532-2152606	LDFNMNDI_02124

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aryl-phospho-beta-D-glucosidase BglH	contig_1:c2155110-2153677	LDFNMNDI_02125

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative 6-phospho-beta-glucosidase	contig_1:c2156513-2155110	LDFNMNDI_02126

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator MurR	contig_1:2156743-2157645	LDFNMNDI_02127

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system beta-glucoside-specific EIIBCA component	contig_1:c2159572-2157686	LDFNMNDI_02128

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription antiterminator LicT	contig_1:c2160520-2159669	LDFNMNDI_02129

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative multidrug resistance ABC transporter ATP-binding/permease protein YheH	contig_1:c2162639-2160855	LDFNMNDI_02130

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative multidrug resistance ABC transporter ATP-binding/permease protein YheI	contig_1:c2164390-2162639	LDFNMNDI_02131

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2164756-2164532	LDFNMNDI_02132

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Divalent metal cation transporter MntH	contig_1:2165007-2166593	LDFNMNDI_02133

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2168677-2166902	LDFNMNDI_02134

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative endonuclease 4	contig_1:c2169790-2168888	LDFNMNDI_02135

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Penicillin-binding protein 1A/1B	contig_1:2170069-2172414	LDFNMNDI_02136

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2172843-2172577	LDFNMNDI_02137

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2173159-2172836	LDFNMNDI_02138

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2174427-2173171	LDFNMNDI_02139

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2174819-2174424	LDFNMNDI_02140

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2175117-2174863	LDFNMNDI_02141

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2175509-2175114	LDFNMNDI_02142

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2175807-2175553	LDFNMNDI_02143

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2176124-2175804	LDFNMNDI_02144

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Catabolite control protein A	contig_1:c2177554-2176553	LDFNMNDI_02145

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Xaa-Pro dipeptidase	contig_1:2177764-2178867	LDFNMNDI_02146

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2179532-2178930	LDFNMNDI_02147

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2179975-2179535	LDFNMNDI_02148

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UTP--glucose-1-phosphate uridylyltransferase	contig_1:c2181038-2180100	LDFNMNDI_02149

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol-3-phosphate dehydrogenase [NAD(P)+]	contig_1:c2182078-2181053	LDFNMNDI_02150

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase	contig_1:c2182952-2182122	LDFNMNDI_02151

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HPr kinase/phosphorylase	contig_1:c2183905-2182967	LDFNMNDI_02152

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2184421-2184071	LDFNMNDI_02153

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2184729-2184421	LDFNMNDI_02154

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chromosome partition protein Smc	contig_1:c2186473-2184905	LDFNMNDI_02155

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2187340-2186573	LDFNMNDI_02156

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2188371-2187337	LDFNMNDI_02157

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate-specific transport system accessory protein PhoU	contig_1:c2189270-2188593	LDFNMNDI_02158

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate import ATP-binding protein PstB 3	contig_1:c2190041-2189283	LDFNMNDI_02159

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate import ATP-binding protein PstB 3	contig_1:c2190863-2190057	LDFNMNDI_02160

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2191762-2190878	LDFNMNDI_02161

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2192682-2191762	LDFNMNDI_02162

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate-binding protein PstS 1	contig_1:c2193654-2192797	LDFNMNDI_02163

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Major cardiolipin synthase ClsA	contig_1:c2195439-2193991	LDFNMNDI_02164

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein FtsX	contig_1:c2196483-2195590	LDFNMNDI_02165

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division ATP-binding protein FtsE	contig_1:c2197153-2196467	LDFNMNDI_02166

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptide chain release factor 2	contig_1:c2198241-2197258	LDFNMNDI_02167

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein translocase subunit SecA	contig_1:c2201020-2198486	LDFNMNDI_02168

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribosome hibernation promotion factor	contig_1:c2201793-2201242	LDFNMNDI_02169

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2202640-2201921	LDFNMNDI_02170

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ComF operon protein 1	contig_1:c2203950-2202637	LDFNMNDI_02171

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system galactose-specific EIIB component	contig_1:c2204351-2204031	LDFNMNDI_02172

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2204746-2204459	LDFNMNDI_02173

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IMPACT family member YigZ	contig_1:2204873-2205517	LDFNMNDI_02174

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional repressor NagR	contig_1:c2206282-2205575	LDFNMNDI_02175

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2206672-2206502	LDFNMNDI_02176

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2207278-2207042	LDFNMNDI_02179

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-glucoside kinase	contig_1:c2208273-2207389	LDFNMNDI_02180

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative N-acetyltransferase YvbK	contig_1:c2208825-2208355	LDFNMNDI_02181

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative membrane protein insertion efficiency factor	contig_1:c2209301-2209005	LDFNMNDI_02182

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2209609-2209433	LDFNMNDI_02183

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1	contig_1:c2210923-2209622	LDFNMNDI_02184

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2211253-2211023	LDFNMNDI_02185

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase epsilon chain	contig_1:c2212012-2211590	LDFNMNDI_02186

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit beta	contig_1:c2213432-2212026	LDFNMNDI_02187

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase gamma chain	contig_1:c2214357-2213455	LDFNMNDI_02188

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit alpha	contig_1:c2215927-2214371	LDFNMNDI_02189

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit delta	contig_1:c2216492-2215950	LDFNMNDI_02190

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit b	contig_1:c2217003-2216479	LDFNMNDI_02191

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit c	contig_1:c2217309-2217094	LDFNMNDI_02192

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ATP synthase subunit a	contig_1:c2218081-2217362	LDFNMNDI_02193

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	SsrA-binding protein	contig_1:c2218847-2218383	LDFNMNDI_02194

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease R	contig_1:c2221226-2218869	LDFNMNDI_02195

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Carboxylesterase	contig_1:c2221984-2221229	LDFNMNDI_02196

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein-export membrane protein SecG	contig_1:c2222323-2222087	LDFNMNDI_02197

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YjdJ	contig_1:c2222719-2222441	LDFNMNDI_02198

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	contig_1:c2223800-2222832	LDFNMNDI_02199

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyrimidine-specific ribonucleoside hydrolase RihB	contig_1:2224083-2225057	LDFNMNDI_02200

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2225062-2225637	LDFNMNDI_02201

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative succinyl-diaminopimelate desuccinylase	contig_1:c2226742-2225702	LDFNMNDI_02202

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:c2227721-2226762	LDFNMNDI_02203

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2227909-2227787	LDFNMNDI_02204

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2228491-2228129	LDFNMNDI_02205

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Enolase	contig_1:c2230532-2229234	LDFNMNDI_02206

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Triosephosphate isomerase	contig_1:c2231403-2230648	LDFNMNDI_02207

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoglycerate kinase	contig_1:c2232697-2231507	LDFNMNDI_02208

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glyceraldehyde-3-phosphate dehydrogenase	contig_1:c2233808-2232807	LDFNMNDI_02209

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Central glycolytic genes regulator	contig_1:c2234886-2233849	LDFNMNDI_02210

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA polymerase sigma-54 factor 1	contig_1:c2236421-2235090	LDFNMNDI_02211

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:2237261-2238187	LDFNMNDI_02213

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2238177-2238950	LDFNMNDI_02214

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2240233-2239319	LDFNMNDI_02215

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2240494-2240234	LDFNMNDI_02216

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative response regulatory protein	contig_1:c2241203-2240781	LDFNMNDI_02217

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2242282-2241392	LDFNMNDI_02218

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Anti-sigma-V factor RsiV	contig_1:c2243264-2242365	LDFNMNDI_02219

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA polymerase sigma factor SigV	contig_1:c2243787-2243281	LDFNMNDI_02220

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative DNA-directed RNA polymerase subunit delta	contig_1:c2244673-2244053	LDFNMNDI_02221

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2245186-2244749	LDFNMNDI_02222

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Octanoyl-[GcvH]:protein N-octanoyltransferase	contig_1:2245349-2246179	LDFNMNDI_02223

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyguanosinetriphosphate triphosphohydrolase-like protein	contig_1:2246163-2247530	LDFNMNDI_02224

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sugar phosphatase YidA	contig_1:2247549-2248358	LDFNMNDI_02225

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	RNA pyrophosphohydrolase	contig_1:c2248847-2248404	LDFNMNDI_02226

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactoylglutathione lyase	contig_1:2248981-2249352	LDFNMNDI_02227

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Trans-2,3-dihydro-3-hydroxyanthranilate isomerase	contig_1:c2250302-2249520	LDFNMNDI_02228

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Delta(1)-pyrroline-2-carboxylate reductase	contig_1:c2251270-2250299	LDFNMNDI_02229

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Histidinol-phosphate aminotransferase	contig_1:2251362-2252756	LDFNMNDI_02230

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Potassium/sodium uptake protein NtpJ	contig_1:c2254310-2252955	LDFNMNDI_02231

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase subunit D	contig_1:c2254975-2254340	LDFNMNDI_02232

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase subunit B	contig_1:c2256358-2254982	LDFNMNDI_02233

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase catalytic subunit A	contig_1:c2258132-2256351	LDFNMNDI_02234

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase subunit G	contig_1:c2258465-2258154	LDFNMNDI_02235

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase subunit C	contig_1:c2259441-2258455	LDFNMNDI_02236

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type proton ATPase subunit E	contig_1:c2260040-2259456	LDFNMNDI_02237

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	V-type sodium ATPase subunit K	contig_1:c2260531-2260061	LDFNMNDI_02238

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2262553-2260550	LDFNMNDI_02239

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2262863-2262540	LDFNMNDI_02240

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD	contig_1:2263209-2263928	LDFNMNDI_02241

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fructose-1,6-bisphosphatase class 3	contig_1:c2266370-2264472	LDFNMNDI_02242

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative protein YhaP	contig_1:c2267794-2266532	LDFNMNDI_02243

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:c2268686-2267787	LDFNMNDI_02244

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UvrABC system protein C	contig_1:c2270608-2268830	LDFNMNDI_02245

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thioredoxin	contig_1:c2271104-2270790	LDFNMNDI_02246

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endonuclease MutS2	contig_1:c2273551-2271191	LDFNMNDI_02247

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2274242-2273694	LDFNMNDI_02248

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cell division protein ZapA	contig_1:c2274737-2274300	LDFNMNDI_02249

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribonuclease HIII	contig_1:2274939-2275856	LDFNMNDI_02250

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2277312-2276398	LDFNMNDI_02251

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2279726-2277435	LDFNMNDI_02252

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleoid occlusion factor SlmA	contig_1:c2280737-2280159	LDFNMNDI_02253

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative hemin import ATP-binding protein HrtA	contig_1:c2281425-2280757	LDFNMNDI_02254

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter permease	contig_1:c2282510-2281440	LDFNMNDI_02255

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH oxidase	contig_1:c2284072-2282708	LDFNMNDI_02256

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2284698-2284069	LDFNMNDI_02257

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2285577-2284708	LDFNMNDI_02258

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2288164-2285684	LDFNMNDI_02259

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2288483-2288148	LDFNMNDI_02260

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2289531-2288494	LDFNMNDI_02261

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2290302-2289622	LDFNMNDI_02262

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2292381-2291911	LDFNMNDI_02264

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Malolactic enzyme	contig_1:2292714-2294354	LDFNMNDI_02265

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Citrate-sodium symporter	contig_1:2294509-2295831	LDFNMNDI_02266

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2296315-2295893	LDFNMNDI_02267

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2297226-2296636	LDFNMNDI_02268

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2297725-2297420	LDFNMNDI_02269

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative pre-16S rRNA nuclease	contig_1:c2298181-2297750	LDFNMNDI_02270

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2298444-2298178	LDFNMNDI_02271

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA-entry nuclease	contig_1:c2299423-2298698	LDFNMNDI_02272

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2299977-2300729	LDFNMNDI_02274

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2300745-2301224	LDFNMNDI_02275

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2302067-2301486	LDFNMNDI_02276

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2302261-2302064	LDFNMNDI_02277

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_746c	contig_1:c2303368-2302526	LDFNMNDI_02278

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304023-2303379	LDFNMNDI_02279

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304308-2304153	LDFNMNDI_02280

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2304501-2304854	LDFNMNDI_02281

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Redox-sensing transcriptional repressor Rex	contig_1:c2305584-2304928	LDFNMNDI_02282

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein YheS	contig_1:2305810-2307744	LDFNMNDI_02283

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Coenzyme A disulfide reductase	contig_1:2307939-2309552	LDFNMNDI_02284

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS30 family transposase IS6770	contig_1:c2311083-2310124	LDFNMNDI_02285

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	contig_1:c2312401-2311271	LDFNMNDI_02286

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Spermidine/putrescine-binding periplasmic protein	contig_1:c2314033-2312960	LDFNMNDI_02287

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Inner membrane ABC transporter permease protein YdcV	contig_1:c2314857-2314030	LDFNMNDI_02288

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Spermidine/putrescine transport system permease protein PotB	contig_1:c2315664-2314858	LDFNMNDI_02289

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Spermidine/putrescine import ATP-binding protein PotA	contig_1:c2316761-2315676	LDFNMNDI_02290

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator PuuR	contig_1:c2317320-2316778	LDFNMNDI_02291

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative acrylyl-CoA reductase AcuI	contig_1:2317578-2318567	LDFNMNDI_02292

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Coenzyme A biosynthesis bifunctional protein CoaBC	contig_1:2318564-2319301	LDFNMNDI_02293

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Coenzyme A biosynthesis bifunctional protein CoaBC	contig_1:2319298-2319849	LDFNMNDI_02294

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pantothenic acid transporter PanT	contig_1:2319865-2320497	LDFNMNDI_02295

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative sugar epimerase YhfK	contig_1:2320582-2321229	LDFNMNDI_02296

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-haloacrylate reductase	contig_1:2321234-2322217	LDFNMNDI_02297

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fumarate reductase flavoprotein subunit	contig_1:c2324191-2322677	LDFNMNDI_02298

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2324329-2325135	LDFNMNDI_02299

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mycothiol acetyltransferase	contig_1:c2325879-2325310	LDFNMNDI_02300

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2326282-2325962	LDFNMNDI_02301

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2328026-2326326	LDFNMNDI_02302

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2329781-2328303	LDFNMNDI_02303

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	UDP-N-acetylenolpyruvoylglucosamine reductase	contig_1:c2331013-2330078	LDFNMNDI_02304

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative oxidoreductase YceM	contig_1:c2332006-2331086	LDFNMNDI_02305

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Exodeoxyribonuclease	contig_1:2332119-2332871	LDFNMNDI_02306

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase III PolC-type	contig_1:2333612-2334145	LDFNMNDI_02307

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Mycothiol acetyltransferase	contig_1:c2335158-2334634	LDFNMNDI_02308

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE	contig_1:c2335624-2335151	LDFNMNDI_02309

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphate acetyltransferase	contig_1:c2336727-2335747	LDFNMNDI_02310

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Uracil-DNA glycosylase	contig_1:c2337560-2336880	LDFNMNDI_02311

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphatase YwpJ	contig_1:2337686-2338555	LDFNMNDI_02312

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2338581-2339096	LDFNMNDI_02313

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2340240-2340692	LDFNMNDI_02314

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2341617-2341051	LDFNMNDI_02315

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2341851-2341672	LDFNMNDI_02316

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2342437-2341928	LDFNMNDI_02317

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2342913-2342533	LDFNMNDI_02318

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nicotinamide riboside transporter PnuC	contig_1:2343247-2343996	LDFNMNDI_02319

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2345457-2344180	LDFNMNDI_02320

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Pyrrolidone-carboxylate peptidase	contig_1:c2346180-2345536	LDFNMNDI_02321

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2347323-2346379	LDFNMNDI_02322

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2348011-2347325	LDFNMNDI_02323

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2348485-2348610	LDFNMNDI_02324

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bacitracin transport ATP-binding protein BcrA	contig_1:2348960-2349865	LDFNMNDI_02325

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2349862-2350635	LDFNMNDI_02326

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine/ornithine antiporter ArcD1	contig_1:c2352240-2350816	LDFNMNDI_02327

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative NrdI-like protein	contig_1:2352451-2352897	LDFNMNDI_02328

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2354944-2352962	LDFNMNDI_02329

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetylmuramic acid 6-phosphate etherase	contig_1:c2355854-2354958	LDFNMNDI_02330

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2356918-2355857	LDFNMNDI_02331

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative phosphoserine phosphatase 2	contig_1:c2357657-2357130	LDFNMNDI_02332

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ABC-F type ribosomal protection protein Eat(A)	contig_1:c2359226-2357724	LDFNMNDI_02333

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerate 2-kinase	contig_1:c2360605-2359484	LDFNMNDI_02334

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-dehydropantoate 2-reductase	contig_1:2360730-2361671	LDFNMNDI_02335

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2362717-2361821	LDFNMNDI_02336

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative amino acid permease YvbW	contig_1:2362986-2364326	LDFNMNDI_02337

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2364766-2365209	LDFNMNDI_02338

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Na(+)/H(+) antiporter NhaC	contig_1:c2366889-2365471	LDFNMNDI_02339

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	p-aminobenzoyl-glutamate hydrolase subunit B	contig_1:c2368515-2367292	LDFNMNDI_02340

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-methionine-binding lipoprotein MetQ	contig_1:c2369385-2368546	LDFNMNDI_02341

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine import system permease protein MetP	contig_1:c2370082-2369402	LDFNMNDI_02342

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine import ATP-binding protein MetN	contig_1:c2371157-2370084	LDFNMNDI_02343

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2371228-2371827	LDFNMNDI_02344

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphorylated carbohydrates phosphatase	contig_1:c2372475-2371804	LDFNMNDI_02345

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Magnesium-transporting ATPase, P-type 1	contig_1:c2375210-2372562	LDFNMNDI_02346

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Nucleoside diphosphate kinase	contig_1:2375899-2376336	LDFNMNDI_02347

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2377224-2376358	LDFNMNDI_02348

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lipoteichoic acid synthase 1	contig_1:c2379477-2377384	LDFNMNDI_02349

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:2379970-2381187	LDFNMNDI_02350

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2382269-2381646	LDFNMNDI_02351

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	6-phospho-beta-glucosidase GmuD	contig_1:c2383825-2382428	LDFNMNDI_02352

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribose operon repressor	contig_1:c2384828-2383857	LDFNMNDI_02353

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2385202-2385627	LDFNMNDI_02354

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2385713-2385886	LDFNMNDI_02355

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyguanosine kinase	contig_1:c2386816-2386115	LDFNMNDI_02356

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	contig_1:c2387272-2386832	LDFNMNDI_02357

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	LOG family protein YvdD	contig_1:c2387847-2387272	LDFNMNDI_02358

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2388635-2388525	LDFNMNDI_02359

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system fructose-specific EIIB'BC component	contig_1:c2389184-2388696	LDFNMNDI_02360

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fatty acid metabolism regulator protein	contig_1:c2390035-2389334	LDFNMNDI_02361

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aryl-phospho-beta-D-glucosidase BglH	contig_1:c2391585-2390143	LDFNMNDI_02362

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system beta-glucoside-specific EIIBCA component	contig_1:c2393464-2391599	LDFNMNDI_02363

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcription antiterminator LicT	contig_1:c2394436-2393585	LDFNMNDI_02364

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sortase A	contig_1:c2395459-2394746	LDFNMNDI_02365

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2395853-2395527	LDFNMNDI_02366

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2396202-2395975	LDFNMNDI_02367

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2397777-2396524	LDFNMNDI_02368

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2397838-2398578	LDFNMNDI_02369

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2399422-2398664	LDFNMNDI_02370

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2400447-2399419	LDFNMNDI_02371

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2403634-2400467	LDFNMNDI_02372

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS110 family transposase ISSsu7	contig_1:2404027-2405244	LDFNMNDI_02373

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative lipid kinase	contig_1:c2406356-2405472	LDFNMNDI_02374

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2408396-2406453	LDFNMNDI_02375

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2408556-2410070	LDFNMNDI_02376

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Foldase protein PrsA	contig_1:c2411733-2410822	LDFNMNDI_02377

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein YknY	contig_1:c2412752-2412114	LDFNMNDI_02378

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2414792-2412756	LDFNMNDI_02379

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2414918-2415583	LDFNMNDI_02380

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2416061-2415756	LDFNMNDI_02381

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2416419-2416054	LDFNMNDI_02382

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2417674-2416430	LDFNMNDI_02383

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2418084-2417671	LDFNMNDI_02384

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase ISEfa13	contig_1:c2419545-2418376	LDFNMNDI_02385

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2420689-2420243	LDFNMNDI_02386

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:2420929-2421219	LDFNMNDI_02387

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS3 family transposase IS1485	contig_1:2421255-2422091	LDFNMNDI_02388

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2423762-2422932	LDFNMNDI_02389

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2425731-2423854	LDFNMNDI_02390

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2427149-2425728	LDFNMNDI_02391

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2430604-2427152	LDFNMNDI_02392

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2430959-2432455	LDFNMNDI_02393

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS4 family transposase IS4Bsu1	contig_1:c2434956-2433850	LDFNMNDI_02394

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2435515-2435351	LDFNMNDI_02395

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2435790-2435512	LDFNMNDI_02396

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2438921-2437530	LDFNMNDI_02397

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Iron-sulfur cluster assembly scaffold protein IscU	contig_1:c2439396-2438926	LDFNMNDI_02398

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine desulfurase SufS	contig_1:c2440618-2439383	LDFNMNDI_02399

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2441901-2440615	LDFNMNDI_02400

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:c2442687-2441914	LDFNMNDI_02401

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine-binding lipoprotein MetQ	contig_1:c2443732-2442884	LDFNMNDI_02402

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine import system permease protein MetP	contig_1:c2444442-2443756	LDFNMNDI_02403

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methionine import ATP-binding protein MetN 2	contig_1:c2445478-2444435	LDFNMNDI_02404

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine cleavage system H protein	contig_1:c2446202-2445864	LDFNMNDI_02405

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein MgsR	contig_1:c2446560-2446204	LDFNMNDI_02406

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptidoglycan glycosyltransferase RodA	contig_1:c2447753-2446566	LDFNMNDI_02407

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator CysL	contig_1:c2448789-2447947	LDFNMNDI_02408

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2449022-2449990	LDFNMNDI_02409

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2450364-2451407	LDFNMNDI_02410

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Methylated-DNA--protein-cysteine methyltransferase, constitutive	contig_1:c2451934-2451470	LDFNMNDI_02411

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Prophage bactoprenol glucosyl transferase	contig_1:2452180-2453127	LDFNMNDI_02412

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA topoisomerase 3	contig_1:c2455435-2453465	LDFNMNDI_02413

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2455847-2455470	LDFNMNDI_02414

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2456536-2455976	LDFNMNDI_02415

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Staphyloferrin B transporter	contig_1:2456686-2457978	LDFNMNDI_02416

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Capreomycidine synthase	contig_1:c2459156-2458038	LDFNMNDI_02417

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine/ornithine antiporter ArcD1	contig_1:c2460591-2459170	LDFNMNDI_02418

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	tRNA-specific 2-thiouridylase MnmA	contig_1:c2461957-2460836	LDFNMNDI_02419

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2462757-2462164	LDFNMNDI_02420

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2463451-2462846	LDFNMNDI_02421

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2463755-2463492	LDFNMNDI_02422

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2464067-2463810	LDFNMNDI_02423

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2464490-2465050	LDFNMNDI_02424

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2465082-2466422	LDFNMNDI_02425

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	contig_1:c2467279-2466692	LDFNMNDI_02426

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2468686-2467409	LDFNMNDI_02427

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2468877-2469659	LDFNMNDI_02428

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2470112-2469768	LDFNMNDI_02429

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine desulfurase IscS	contig_1:c2471385-2470249	LDFNMNDI_02430

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative ribose-phosphate pyrophosphokinase 2	contig_1:c2472538-2471564	LDFNMNDI_02431

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2473493-2472618	LDFNMNDI_02432

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Neutral endopeptidase	contig_1:2473625-2475532	LDFNMNDI_02433

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2479093-2475830	LDFNMNDI_02434

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	contig_1:c2479909-2479364	LDFNMNDI_02435

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	contig_1:c2480613-2479921	LDFNMNDI_02436

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2480916-2480632	LDFNMNDI_02437

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	ADP-ribose pyrophosphatase	contig_1:c2481492-2480929	LDFNMNDI_02438

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2481720-2482382	LDFNMNDI_02439

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	TelA-like protein	contig_1:2482505-2483701	LDFNMNDI_02440

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative amino acid permease YhdG	contig_1:c2485177-2483801	LDFNMNDI_02441

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glucose uptake protein GlcU	contig_1:c2486080-2485214	LDFNMNDI_02442

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Sensor histidine kinase GraS	contig_1:c2487194-2486169	LDFNMNDI_02443

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Response regulator protein GraR	contig_1:c2487886-2487212	LDFNMNDI_02444

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2488963-2488070	LDFNMNDI_02445

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2490756-2489038	LDFNMNDI_02446

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2492062-2490749	LDFNMNDI_02447

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2496570-2492062	LDFNMNDI_02448

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2497389-2496871	LDFNMNDI_02449

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2498011-2497391	LDFNMNDI_02450

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	L-arabinose transport system permease protein AraQ	contig_1:c2498862-2498008	LDFNMNDI_02451

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose transport system permease protein LacF	contig_1:c2499770-2498859	LDFNMNDI_02452

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2501145-2499811	LDFNMNDI_02453

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative manganese catalase	contig_1:2501353-2502183	LDFNMNDI_02454

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2502939-2502256	LDFNMNDI_02455

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2503013-2503615	LDFNMNDI_02456

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	SOS response-associated protein YedK	contig_1:c2504396-2503821	LDFNMNDI_02457

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator AcuR	contig_1:c2505455-2504874	LDFNMNDI_02458

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2506142-2505639	LDFNMNDI_02459

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2506265-2506164	LDFNMNDI_02460

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative pyridine nucleotide-disulfide oxidoreductase RclA	contig_1:c2507594-2506287	LDFNMNDI_02461

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Organic hydroperoxide resistance protein OhrB	contig_1:c2508172-2507771	LDFNMNDI_02462

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2508463-2508257	LDFNMNDI_02463

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphomannomutase/phosphoglucomutase	contig_1:c2510060-2508558	LDFNMNDI_02464

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Arginine repressor	contig_1:c2510533-2510078	LDFNMNDI_02465

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2511080-2510631	LDFNMNDI_02466

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Riboflavin transporter RibZ	contig_1:2511471-2512844	LDFNMNDI_02467

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycine oxidase	contig_1:2512919-2514031	LDFNMNDI_02468

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoenolpyruvate carboxykinase (ATP)	contig_1:c2515740-2514103	LDFNMNDI_02469

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2516503-2515907	LDFNMNDI_02470

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Epoxyqueuosine reductase	contig_1:c2518037-2516886	LDFNMNDI_02471

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2518808-2518056	LDFNMNDI_02472

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Manganese ABC transporter substrate-binding lipoprotein	contig_1:c2519899-2518949	LDFNMNDI_02473

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Manganese transport system membrane protein MntB	contig_1:c2520739-2519900	LDFNMNDI_02474

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Manganese import ATP-binding protein ScaC	contig_1:c2521482-2520736	LDFNMNDI_02475

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative transport protein YifK	contig_1:2521721-2523091	LDFNMNDI_02476

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2524038-2523142	LDFNMNDI_02477

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2524322-2524152	LDFNMNDI_02478

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione-regulated potassium-efflux system ancillary protein KefG	contig_1:c2524996-2524319	LDFNMNDI_02479

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional activator RhaS	contig_1:c2525993-2525088	LDFNMNDI_02480

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Lactose permease	contig_1:2526168-2527622	LDFNMNDI_02481

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aldose 1-epimerase	contig_1:2527638-2528669	LDFNMNDI_02482

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Galactokinase	contig_1:2528676-2529863	LDFNMNDI_02483

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA polymerase IV	contig_1:2530017-2531399	LDFNMNDI_02484

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2531371-2531757	LDFNMNDI_02485

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2532547-2531879	LDFNMNDI_02486

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH peroxidase	contig_1:c2534446-2533067	LDFNMNDI_02487

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative N-acetyl-LL-diaminopimelate aminotransferase	contig_1:c2535789-2534620	LDFNMNDI_02488

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	N-acetylcysteine deacetylase	contig_1:c2536915-2535764	LDFNMNDI_02489

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartokinase 3	contig_1:c2538236-2536875	LDFNMNDI_02490

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aspartate-semialdehyde dehydrogenase	contig_1:c2539234-2538233	LDFNMNDI_02491

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	contig_1:c2539945-2539250	LDFNMNDI_02492

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	4-hydroxy-tetrahydrodipicolinate reductase	contig_1:c2540667-2539951	LDFNMNDI_02493

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	4-hydroxy-tetrahydrodipicolinate synthase	contig_1:c2541545-2540664	LDFNMNDI_02494

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diaminopimelate epimerase	contig_1:c2542348-2541548	LDFNMNDI_02495

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Diaminopimelate decarboxylase	contig_1:c2543594-2542335	LDFNMNDI_02496

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative alkyl/aryl-sulfatase YjcS	contig_1:c2545778-2543883	LDFNMNDI_02497

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Chaperone protein DnaJ	contig_1:c2546673-2545906	LDFNMNDI_02498

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Elongation factor P	contig_1:c2547434-2546871	LDFNMNDI_02499

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cysteine synthase	contig_1:2547861-2548778	LDFNMNDI_02500

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Cystathionine gamma-synthase	contig_1:2548791-2549936	LDFNMNDI_02501

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	S-ribosylhomocysteine lyase	contig_1:2550108-2550566	LDFNMNDI_02502

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glutathione peroxidase BsaA	contig_1:2550727-2551197	LDFNMNDI_02503

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein Spx	contig_1:c2557194-2556919	LDFNMNDI_02507

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Regulatory protein Spx	contig_1:c2557618-2557208	LDFNMNDI_02508

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative ATP-dependent DNA helicase YjcD	contig_1:c2560154-2557968	LDFNMNDI_02509

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2560374-2561057	LDFNMNDI_02510

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Deoxyguanosine kinase	contig_1:c2561844-2561137	LDFNMNDI_02511

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2562247-2562041	LDFNMNDI_02512

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Accessory gene regulator protein B	contig_1:2562493-2563095	LDFNMNDI_02513

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2563076-2563186	LDFNMNDI_02514

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2563236-2564516	LDFNMNDI_02515

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Accessory gene regulator protein A	contig_1:2564529-2565257	LDFNMNDI_02516

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2566848-2565325	LDFNMNDI_02517

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2567095-2568276	LDFNMNDI_02518

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Trehalose-6-phosphate hydrolase	contig_1:c2569966-2568338	LDFNMNDI_02519

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2573119-2570408	LDFNMNDI_02520

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative ABC transporter ATP-binding protein	contig_1:c2573830-2573129	LDFNMNDI_02521

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Isochorismatase family protein YecD	contig_1:2574015-2574617	LDFNMNDI_02522

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator DegA	contig_1:2574699-2575712	LDFNMNDI_02523

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ribokinase	contig_1:2575822-2576745	LDFNMNDI_02524

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	D-ribose pyranase	contig_1:2576767-2577162	LDFNMNDI_02525

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system beta-glucoside-specific EIIBCA component	contig_1:2577162-2578535	LDFNMNDI_02526

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2578895-2581042	LDFNMNDI_02527

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aldose 1-epimerase	contig_1:c2582139-2581090	LDFNMNDI_02528

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bacitracin export permease protein BceB	contig_1:c2584175-2582373	LDFNMNDI_02529

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Bacitracin export ATP-binding protein BceA	contig_1:c2584941-2584189	LDFNMNDI_02530

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2585312-2584950	LDFNMNDI_02531

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2586354-2585482	LDFNMNDI_02532

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2586890-2586402	LDFNMNDI_02533

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2587858-2587028	LDFNMNDI_02534

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2588481-2587873	LDFNMNDI_02535

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2588791-2588474	LDFNMNDI_02536

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative membrane protein YdfK	contig_1:c2589675-2588947	LDFNMNDI_02537

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator GltC	contig_1:2589837-2590718	LDFNMNDI_02538

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Adaptive-response sensory-kinase SasA	contig_1:c2591995-2590952	LDFNMNDI_02539

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Heme response regulator HssR	contig_1:c2592666-2591998	LDFNMNDI_02540

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Vitamin B12 import ATP-binding protein BtuD	contig_1:2592808-2595144	LDFNMNDI_02541

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2595709-2595407	LDFNMNDI_02542

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Gallate decarboxylase	contig_1:2595899-2597374	LDFNMNDI_02543

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative UbiX-like flavin prenyltransferase	contig_1:2597421-2598005	LDFNMNDI_02544

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2597974-2598426	LDFNMNDI_02545

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2598753-2598469	LDFNMNDI_02546

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2599694-2598984	LDFNMNDI_02547

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug export protein EmrB	contig_1:c2601163-2599691	LDFNMNDI_02548

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2601301-2601774	LDFNMNDI_02549

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2602485-2601931	LDFNMNDI_02550

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phenolic acid decarboxylase PadC	contig_1:2602590-2603120	LDFNMNDI_02551

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Peptidyl-lysine N-acetyltransferase YiaC	contig_1:c2604047-2603604	LDFNMNDI_02552

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2605223-2604063	LDFNMNDI_02553

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2605521-2607182	LDFNMNDI_02554

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Maltose 6'-phosphate phosphatase	contig_1:c2608115-2607285	LDFNMNDI_02555

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS system glucose-specific EIICBA component	contig_1:c2610469-2608304	LDFNMNDI_02556

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Maltose phosphorylase	contig_1:2610728-2613022	LDFNMNDI_02557

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Beta-phosphoglucomutase	contig_1:2613015-2613680	LDFNMNDI_02558

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Aldose 1-epimerase	contig_1:2613673-2614680	LDFNMNDI_02559

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Catabolite control protein A	contig_1:2614702-2615727	LDFNMNDI_02560

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2616106-2618064	LDFNMNDI_02561

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2618646-2618050	LDFNMNDI_02562

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Na(+)/H(+) antiporter NhaC	contig_1:c2620257-2618890	LDFNMNDI_02563

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative glutamate/gamma-aminobutyrate antiporter	contig_1:c2621787-2620366	LDFNMNDI_02564

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Histidine decarboxylase	contig_1:c2623907-2622030	LDFNMNDI_02565

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Tyrosine--tRNA ligase 1	contig_1:c2625454-2624198	LDFNMNDI_02566

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2626026-2627327	LDFNMNDI_02567

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator BetI	contig_1:c2627993-2627394	LDFNMNDI_02568

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug efflux system ATP-binding protein	contig_1:2628247-2629128	LDFNMNDI_02569

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug efflux system permease protein	contig_1:2629141-2630751	LDFNMNDI_02570

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional activator protein Anr	contig_1:c2631489-2630830	LDFNMNDI_02571

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2632342-2632079	LDFNMNDI_02572

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2634052-2632361	LDFNMNDI_02573

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2634573-2634052	LDFNMNDI_02574

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2635613-2634954	LDFNMNDI_02575

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL	contig_1:c2636344-2635739	LDFNMNDI_02576

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK	contig_1:c2637356-2636373	LDFNMNDI_02577

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	PEP-dependent dihydroxyacetone kinase 2, phosphoryl donor subunit DhaM	contig_1:c2637753-2637358	LDFNMNDI_02578

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2637906-2638226	LDFNMNDI_02579

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2639194-2638337	LDFNMNDI_02580

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Poly-beta-1,6-N-acetyl-D-glucosamine synthase	contig_1:c2640606-2639302	LDFNMNDI_02581

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2641112-2640603	LDFNMNDI_02582

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	DNA helicase IV	contig_1:c2643421-2641286	LDFNMNDI_02583

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Coenzyme A disulfide reductase	contig_1:c2645159-2643504	LDFNMNDI_02584

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Thiosulfate sulfurtransferase GlpE	contig_1:c2645475-2645161	LDFNMNDI_02585

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Copper-sensing transcriptional repressor CsoR	contig_1:2645645-2645905	LDFNMNDI_02586

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2645919-2646233	LDFNMNDI_02587

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Putative cardiolipin synthase	contig_1:c2647315-2646761	LDFNMNDI_02588

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endonuclease MutS2	contig_1:c2649365-2647437	LDFNMNDI_02589

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol uptake facilitator protein	contig_1:c2650387-2649671	LDFNMNDI_02590

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Alpha-glycerophosphate oxidase	contig_1:c2652211-2650388	LDFNMNDI_02591

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Glycerol kinase	contig_1:c2653721-2652225	LDFNMNDI_02592

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2655318-2653858	LDFNMNDI_02593

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH oxidase	contig_1:c2656603-2655308	LDFNMNDI_02594

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Protein/nucleic acid deglycase HchA	contig_1:c2657625-2656948	LDFNMNDI_02595

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative oxidoreductase	contig_1:c2658746-2657655	LDFNMNDI_02596

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2659283-2658849	LDFNMNDI_02597

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Oligo-1,6-glucosidase	contig_1:c2661068-2659431	LDFNMNDI_02598

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Guanine/hypoxanthine permease PbuG	contig_1:c2662709-2661396	LDFNMNDI_02599

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2663177-2662953	LDFNMNDI_02600

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2663565-2663197	LDFNMNDI_02601

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2664468-2663758	LDFNMNDI_02602

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Spermidine/spermine N(1)-acetyltransferase	contig_1:c2665007-2664486	LDFNMNDI_02603

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Transcriptional regulator SlyA	contig_1:c2665472-2665020	LDFNMNDI_02604

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	NADH pyrophosphatase	contig_1:c2666213-2665608	LDFNMNDI_02605

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2667030-2666410	LDFNMNDI_02606

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Fructose-bisphosphate aldolase	contig_1:c2667901-2667032	LDFNMNDI_02607

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2668139-2667924	LDFNMNDI_02608

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2668331-2668194	LDFNMNDI_02609

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Ascorbate-specific PTS system EIIC component	contig_1:c2669639-2668350	LDFNMNDI_02610

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2669886-2669665	LDFNMNDI_02611

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2672084-2670003	LDFNMNDI_02612

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Endoribonuclease toxin MazF	contig_1:c2673141-2672800	LDFNMNDI_02613

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2673374-2673141	LDFNMNDI_02614

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2674402-2673638	LDFNMNDI_02615

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase	contig_1:c2675383-2674514	LDFNMNDI_02616

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2676490-2675405	LDFNMNDI_02617

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Phosphoribosyl-dephospho-CoA transferase	contig_1:c2677107-2676514	LDFNMNDI_02618

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic	contig_1:c2678787-2677111	LDFNMNDI_02619

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Malonate decarboxylase acyl carrier protein	contig_1:c2679076-2678777	LDFNMNDI_02620

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Acetyl-S-ACP:malonate ACP transferase	contig_1:c2680824-2679178	LDFNMNDI_02621

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Malonyl CoA-acyl carrier protein transacylase	contig_1:c2681743-2680904	LDFNMNDI_02622

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	HTH-type transcriptional regulator HdfR	contig_1:2681859-2682731	LDFNMNDI_02623

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:c2683278-2682916	LDFNMNDI_02624

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_1:2683422-2684861	LDFNMNDI_02625

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	putative cation-transporting ATPase F	contig_1:c2685455-2684868	LDFNMNDI_02626

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:366142-367699	LDFNMNDI_00358

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:367931-370841	LDFNMNDI_00359

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:370940-371050	LDFNMNDI_00360

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Val	contig_1:371066-371140	LDFNMNDI_00361

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Lys	contig_1:371142-371216	LDFNMNDI_00362

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:371222-371305	LDFNMNDI_00363

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Thr	contig_1:371321-371396	LDFNMNDI_00364

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gly	contig_1:371406-371477	LDFNMNDI_00365

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:371494-371579	LDFNMNDI_00366

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:371589-371664	LDFNMNDI_00367

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Pro	contig_1:371685-371758	LDFNMNDI_00368

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:371814-371890	LDFNMNDI_00369

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:536708-538265	LDFNMNDI_00511

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ala	contig_1:538342-538414	LDFNMNDI_00512

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:538594-541504	LDFNMNDI_00513

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:541605-541715	LDFNMNDI_00514

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Val	contig_1:541731-541805	LDFNMNDI_00515

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Lys	contig_1:541807-541881	LDFNMNDI_00516

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:541887-541970	LDFNMNDI_00517

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Thr	contig_1:541986-542061	LDFNMNDI_00518

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gly	contig_1:542071-542142	LDFNMNDI_00519

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:542159-542244	LDFNMNDI_00520

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:542254-542329	LDFNMNDI_00521

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Pro	contig_1:542338-542411	LDFNMNDI_00522

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ala	contig_1:542431-542503	LDFNMNDI_00523

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Met	contig_1:542530-542605	LDFNMNDI_00524

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Met	contig_1:542617-542692	LDFNMNDI_00525

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:542715-542804	LDFNMNDI_00526

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Met	contig_1:542817-542890	LDFNMNDI_00527

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asp	contig_1:542909-542984	LDFNMNDI_00528

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gly	contig_1:542986-543056	LDFNMNDI_00529

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ile	contig_1:543068-543143	LDFNMNDI_00530

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:543166-543255	LDFNMNDI_00531

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Glu	contig_1:543275-543348	LDFNMNDI_00532

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:543371-543460	LDFNMNDI_00533

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Met	contig_1:543471-543546	LDFNMNDI_00534

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asp	contig_1:543564-543638	LDFNMNDI_00535

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Phe	contig_1:543640-543714	LDFNMNDI_00536

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gly	contig_1:543718-543788	LDFNMNDI_00537

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ile	contig_1:543800-543875	LDFNMNDI_00538

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Glu	contig_1:543885-543958	LDFNMNDI_00539

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:617131-618688	LDFNMNDI_00598

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:618920-621830	LDFNMNDI_00599

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:621929-622039	LDFNMNDI_00600

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Lys	contig_1:c732202-732128	LDFNMNDI_00705

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Thr	contig_1:846139-846211	LDFNMNDI_00836

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:934767-936324	LDFNMNDI_00920

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:936671-939581	LDFNMNDI_00921

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:939680-939790	LDFNMNDI_00922

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asn	contig_1:939802-939877	LDFNMNDI_00923

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Thr	contig_1:c949032-948960	LDFNMNDI_00931

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asn	contig_1:949247-949322	LDFNMNDI_00932

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:1032432-1032506	LDFNMNDI_01012

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:1109610-1109685	LDFNMNDI_01078

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:1238235-1239792	LDFNMNDI_01195

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ala	contig_1:1239869-1239941	LDFNMNDI_01196

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:1240121-1243031	LDFNMNDI_01197

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:1243130-1243240	LDFNMNDI_01198

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asn	contig_1:1243252-1243327	LDFNMNDI_01199

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:1243365-1243455	LDFNMNDI_01200

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Glu	contig_1:1243468-1243541	LDFNMNDI_01201

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Val	contig_1:1243555-1243629	LDFNMNDI_01202

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Asp	contig_1:1243637-1243712	LDFNMNDI_01203

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Phe	contig_1:1243746-1243821	LDFNMNDI_01204

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Tyr	contig_1:1243822-1243904	LDFNMNDI_01205

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Trp	contig_1:1243910-1243983	LDFNMNDI_01206

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	His	contig_1:1243986-1244059	LDFNMNDI_01207

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gln	contig_1:1244069-1244142	LDFNMNDI_01208

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Cys	contig_1:1244187-1244257	LDFNMNDI_01209

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:1244277-1244363	LDFNMNDI_01210

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	His	contig_1:1244424-1244497	LDFNMNDI_01211

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gln	contig_1:1244505-1244578	LDFNMNDI_01212

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:1244592-1244678	LDFNMNDI_01213

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:c1412524-1412440	LDFNMNDI_01376

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Leu	contig_1:1505093-1505178	LDFNMNDI_01462

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gln	contig_1:c1510587-1510515	LDFNMNDI_01473

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Met	contig_1:c1739759-1739684	LDFNMNDI_01695

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:c1961625-1961538	LDFNMNDI_01907

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tmRNA	transfer-messenger RNA, SsrA	contig_1:1993770-1994133	LDFNMNDI_01948

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gln	contig_1:c2206868-2206795	LDFNMNDI_02177

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Tyr	contig_1:c2206954-2206874	LDFNMNDI_02178

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Arg	contig_1:2236480-2236553	LDFNMNDI_02212

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Ser	contig_1:c2290902-2290810	LDFNMNDI_02263

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:tRNA	Gly	contig_1:c2299860-2299790	LDFNMNDI_02273

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	5S ribosomal RNA	contig_1:c2551363-2551253	LDFNMNDI_02504

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	23S ribosomal RNA	contig_1:c2554372-2551462	LDFNMNDI_02505

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::RNA feature xref gene does not exist
outdir/prokka:rRNA	16S ribosomal RNA	contig_1:c2556161-2554604	LDFNMNDI_02506

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:118-498	LDFNMNDI_02627

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:480-1394	LDFNMNDI_02628

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:1634-2323	LDFNMNDI_02629

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:3176-3913	LDFNMNDI_02630

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:3941-4477	LDFNMNDI_02631

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:4493-4663	LDFNMNDI_02632

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:5323-5634	LDFNMNDI_02633

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_2:5800-6972	LDFNMNDI_02634

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:7027-7143	LDFNMNDI_02635

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:c7339-7235	LDFNMNDI_02636

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug resistance ABC transporter ATP-binding/permease protein BmrA	contig_2:c9063-7360	LDFNMNDI_02637

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:9135-9248	LDFNMNDI_02638

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:9345-9548	LDFNMNDI_02639

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:9869-10249	LDFNMNDI_02640

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:10231-11145	LDFNMNDI_02641

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:11385-12074	LDFNMNDI_02642

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:12927-13664	LDFNMNDI_02643

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:13692-14228	LDFNMNDI_02644

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:14244-14414	LDFNMNDI_02645

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:15074-15385	LDFNMNDI_02646

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	IS256 family transposase IS1542	contig_2:15551-16723	LDFNMNDI_02647

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:16778-16894	LDFNMNDI_02648

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:c17090-16986	LDFNMNDI_02649

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	Multidrug resistance ABC transporter ATP-binding/permease protein BmrA	contig_2:c18814-17111	LDFNMNDI_02650

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:18886-18999	LDFNMNDI_02651

DiscRep_SUB:FEATURE_LOCATION_CONFLICT::Coding region xref gene does not exist
outdir/prokka:CDS	hypothetical protein	contig_2:19096-19299	LDFNMNDI_02652

DiscRep_ALL:OVERLAPPING_CDS::14 coding regions overlap another coding region with a similar or identical name.
DiscRep_SUB:OVERLAPPING_CDS::14 coding regions overlap another coding region with a similar or identical name that do not have the appropriate note text
outdir/prokka:CDS	Lactaldehyde reductase	contig_1:c129828-129004	LDFNMNDI_00128
outdir/prokka:CDS	Lactaldehyde reductase	contig_1:c130154-129825	LDFNMNDI_00129
outdir/prokka:CDS	Transcriptional regulatory protein DcuR	contig_1:c1421142-1420660	LDFNMNDI_01384
outdir/prokka:CDS	Transcriptional regulatory protein DcuR	contig_1:c1421377-1421117	LDFNMNDI_01385
outdir/prokka:CDS	p-aminobenzoyl-glutamate transport protein	contig_1:1580565-1581320	LDFNMNDI_01535
outdir/prokka:CDS	p-aminobenzoyl-glutamate transport protein	contig_1:1581259-1581978	LDFNMNDI_01536
outdir/prokka:CDS	General stress protein A	contig_1:c1736635-1735733	LDFNMNDI_01691
outdir/prokka:CDS	General stress protein A	contig_1:c1737485-1736628	LDFNMNDI_01692
outdir/prokka:CDS	Na(+), Li(+), K(+)/H(+) antiporter subunit B	contig_1:c1801708-1800935	LDFNMNDI_01762
outdir/prokka:CDS	Na(+), Li(+), K(+)/H(+) antiporter subunit B	contig_1:c1802388-1801705	LDFNMNDI_01763
outdir/prokka:CDS	PTS system maltose-specific EIICB component	contig_1:c1898822-1898466	LDFNMNDI_01846
outdir/prokka:CDS	PTS system maltose-specific EIICB component	contig_1:c1900047-1898782	LDFNMNDI_01847
outdir/prokka:CDS	Coenzyme A biosynthesis bifunctional protein CoaBC	contig_1:2318564-2319301	LDFNMNDI_02293
outdir/prokka:CDS	Coenzyme A biosynthesis bifunctional protein CoaBC	contig_1:2319298-2319849	LDFNMNDI_02294

DiscRep_ALL:SUSPECT_PRODUCT_NAMES::12 product_names contain suspect phrase or characters
DiscRep_SUB:SUSPECT_PRODUCT_NAMES::May contain database identifier more appropriate in note; remove from product name
DiscRep_SUB:SUSPECT_PRODUCT_NAMES::4 features contains three or more numbers together that may be identifiers more appropriate in note
outdir/prokka:CDS	Putative metallophosphoesterase MG207	contig_1:1537245-1537763	LDFNMNDI_01494
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_746c	contig_1:c2303368-2302526	LDFNMNDI_02278
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304023-2303379	LDFNMNDI_02279
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304308-2304153	LDFNMNDI_02280

DiscRep_SUB:SUSPECT_PRODUCT_NAMES::3 features Contains underscore
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_746c	contig_1:c2303368-2302526	LDFNMNDI_02278
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304023-2303379	LDFNMNDI_02279
outdir/prokka:CDS	Putative two-component membrane permease complex subunit SMU_747c	contig_1:c2304308-2304153	LDFNMNDI_02280

DiscRep_SUB:SUSPECT_PRODUCT_NAMES::use protein instead of gene as appropriate
DiscRep_SUB:SUSPECT_PRODUCT_NAMES::4 features contains 'gene'
outdir/prokka:CDS	Accessory gene regulator protein B	contig_1:c1720706-1720125	LDFNMNDI_01674
outdir/prokka:CDS	Accessory gene regulator protein A	contig_1:c1721613-1720873	LDFNMNDI_01675
outdir/prokka:CDS	Accessory gene regulator protein B	contig_1:2562493-2563095	LDFNMNDI_02513
outdir/prokka:CDS	Accessory gene regulator protein A	contig_1:2564529-2565257	LDFNMNDI_02516

DiscRep_SUB:SUSPECT_PRODUCT_NAMES::1 features contains 'genes'
outdir/prokka:CDS	Central glycolytic genes regulator	contig_1:c2234886-2233849	LDFNMNDI_02210

DiscRep_ALL:DISC_QUALITY_SCORES::Quality scores are missing on all sequences.

DiscRep_ALL:ONCALLER_COMMENT_PRESENT::2 comment descriptors were found (all same)
outdir/prokka:contig_1:Annotated using prokka 1.14.6 from https://github.com/tseemann/prokka
outdir/prokka:contig_2:Annotated using prokka 1.14.6 from https://github.com/tseemann/prokka

DiscRep_ALL:SHORT_PROT_SEQUENCES::41 protein sequences are shorter than 50 aa.
outdir/prokka:contig_1_7 (length 42)
outdir/prokka:contig_1_47 (length 38)
outdir/prokka:contig_1_82 (length 29)
outdir/prokka:contig_1_257 (length 38)
outdir/prokka:contig_1_305 (length 40)
outdir/prokka:contig_1_319 (length 45)
outdir/prokka:contig_1_341 (length 44)
outdir/prokka:contig_1_657 (length 44)
outdir/prokka:contig_1_682 (length 36)
outdir/prokka:contig_1_724 (length 45)
outdir/prokka:contig_1_768 (length 45)
outdir/prokka:contig_1_794 (length 29)
outdir/prokka:contig_1_948 (length 49)
outdir/prokka:contig_1_992 (length 38)
outdir/prokka:contig_1_1299 (length 42)
outdir/prokka:contig_1_1376 (length 42)
outdir/prokka:contig_1_1512 (length 35)
outdir/prokka:contig_1_1626 (length 49)
outdir/prokka:contig_1_1647 (length 47)
outdir/prokka:contig_1_1690 (length 44)
outdir/prokka:contig_1_1710 (length 42)
outdir/prokka:contig_1_1826 (length 49)
outdir/prokka:contig_1_1829 (length 45)
outdir/prokka:contig_1_1837 (length 36)
outdir/prokka:contig_1_1839 (length 49)
outdir/prokka:contig_1_1923 (length 44)
outdir/prokka:contig_1_1936 (length 31)
outdir/prokka:contig_1_1999 (length 40)
outdir/prokka:contig_1_2029 (length 31)
outdir/prokka:contig_1_2123 (length 40)
outdir/prokka:contig_1_2240 (length 41)
outdir/prokka:contig_1_2275 (length 36)
outdir/prokka:contig_1_2376 (length 33)
outdir/prokka:contig_1_2427 (length 36)
outdir/prokka:contig_1_2522 (length 45)
outdir/prokka:contig_2_9 (length 38)
outdir/prokka:contig_2_10 (length 34)
outdir/prokka:contig_2_12 (length 37)
outdir/prokka:contig_2_22 (length 38)
outdir/prokka:contig_2_23 (length 34)
outdir/prokka:contig_2_25 (length 37)

DiscRep_ALL:MISSING_GENOMEASSEMBLY_COMMENTS::2 bioseqs are missing GenomeAssembly structured comments
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_2 (length 19502)

DiscRep_ALL:MOLTYPE_NOT_MRNA::2 molecule types are not set as mRNA.
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_2 (length 19502)

DiscRep_ALL:TECHNIQUE_NOT_TSA::2 technique are not set as TSA
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_2 (length 19502)

DiscRep_ALL:MISSING_STRUCTURED_COMMENT::2 sequences do not include structured comments.
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_2 (length 19502)

DiscRep_ALL:MISSING_PROJECT::2567 sequences do not include project.
outdir/prokka:contig_1 (length 2685508)
outdir/prokka:contig_1_1 (length 443)
outdir/prokka:contig_1_2 (length 492)
outdir/prokka:contig_1_3 (length 611)
outdir/prokka:contig_1_4 (length 475)
outdir/prokka:contig_1_5 (length 121)
outdir/prokka:contig_1_6 (length 121)
outdir/prokka:contig_1_7 (length 42)
outdir/prokka:contig_1_8 (length 564)
outdir/prokka:contig_1_9 (length 286)
outdir/prokka:contig_1_10 (length 377)
outdir/prokka:contig_1_11 (length 104)
outdir/prokka:contig_1_12 (length 152)
outdir/prokka:contig_1_13 (length 417)
outdir/prokka:contig_1_14 (length 105)
outdir/prokka:contig_1_15 (length 106)
outdir/prokka:contig_1_16 (length 471)
outdir/prokka:contig_1_17 (length 438)
outdir/prokka:contig_1_18 (length 232)
outdir/prokka:contig_1_19 (length 329)
outdir/prokka:contig_1_20 (length 267)
outdir/prokka:contig_1_21 (length 247)
outdir/prokka:contig_1_22 (length 245)
outdir/prokka:contig_1_23 (length 416)
outdir/prokka:contig_1_24 (length 93)
outdir/prokka:contig_1_25 (length 143)
outdir/prokka:contig_1_26 (length 464)
outdir/prokka:contig_1_27 (length 368)
outdir/prokka:contig_1_28 (length 55)
outdir/prokka:contig_1_29 (length 211)
outdir/prokka:contig_1_30 (length 413)
outdir/prokka:contig_1_31 (length 231)
outdir/prokka:contig_1_32 (length 180)
outdir/prokka:contig_1_33 (length 75)
outdir/prokka:contig_1_34 (length 379)
outdir/prokka:contig_1_35 (length 251)
outdir/prokka:contig_1_36 (length 106)
outdir/prokka:contig_1_37 (length 112)
outdir/prokka:contig_1_38 (length 418)
outdir/prokka:contig_1_39 (length 651)
outdir/prokka:contig_1_40 (length 492)
outdir/prokka:contig_1_41 (length 327)
outdir/prokka:contig_1_42 (length 293)
outdir/prokka:contig_1_43 (length 184)
outdir/prokka:contig_1_44 (length 347)
outdir/prokka:contig_1_45 (length 134)
outdir/prokka:contig_1_46 (length 82)
outdir/prokka:contig_1_47 (length 38)
outdir/prokka:contig_1_48 (length 241)
outdir/prokka:contig_1_49 (length 436)
outdir/prokka:contig_1_50 (length 263)
outdir/prokka:contig_1_51 (length 211)
outdir/prokka:contig_1_52 (length 350)
outdir/prokka:contig_1_53 (length 312)
outdir/prokka:contig_1_54 (length 216)
outdir/prokka:contig_1_55 (length 169)
outdir/prokka:contig_1_56 (length 127)
outdir/prokka:contig_1_57 (length 204)
outdir/prokka:contig_1_58 (length 87)
outdir/prokka:contig_1_59 (length 79)
outdir/prokka:contig_1_60 (length 324)
outdir/prokka:contig_1_61 (length 151)
outdir/prokka:contig_1_62 (length 481)
outdir/prokka:contig_1_63 (length 311)
outdir/prokka:contig_1_64 (length 252)
outdir/prokka:contig_1_65 (length 399)
outdir/prokka:contig_1_66 (length 163)
outdir/prokka:contig_1_67 (length 381)
outdir/prokka:contig_1_68 (length 455)
outdir/prokka:contig_1_69 (length 92)
outdir/prokka:contig_1_70 (length 152)
outdir/prokka:contig_1_71 (length 206)
outdir/prokka:contig_1_72 (length 680)
outdir/prokka:contig_1_73 (length 390)
outdir/prokka:contig_1_74 (length 379)
outdir/prokka:contig_1_75 (length 185)
outdir/prokka:contig_1_76 (length 1010)
outdir/prokka:contig_1_77 (length 414)
outdir/prokka:contig_1_78 (length 594)
outdir/prokka:contig_1_79 (length 545)
outdir/prokka:contig_1_80 (length 457)
outdir/prokka:contig_1_81 (length 79)
outdir/prokka:contig_1_82 (length 29)
outdir/prokka:contig_1_83 (length 891)
outdir/prokka:contig_1_84 (length 307)
outdir/prokka:contig_1_85 (length 334)
outdir/prokka:contig_1_86 (length 98)
outdir/prokka:contig_1_87 (length 97)
outdir/prokka:contig_1_88 (length 183)
outdir/prokka:contig_1_89 (length 99)
outdir/prokka:contig_1_90 (length 102)
outdir/prokka:contig_1_91 (length 464)
outdir/prokka:contig_1_92 (length 205)
outdir/prokka:contig_1_93 (length 427)
outdir/prokka:contig_1_94 (length 159)
outdir/prokka:contig_1_95 (length 429)
outdir/prokka:contig_1_96 (length 201)
outdir/prokka:contig_1_97 (length 154)
outdir/prokka:contig_1_98 (length 106)
outdir/prokka:contig_1_99 (length 359)
outdir/prokka:contig_1_100 (length 116)
outdir/prokka:contig_1_101 (length 315)
outdir/prokka:contig_1_102 (length 472)
outdir/prokka:contig_1_103 (length 281)
outdir/prokka:contig_1_104 (length 146)
outdir/prokka:contig_1_105 (length 55)
outdir/prokka:contig_1_106 (length 228)
outdir/prokka:contig_1_107 (length 229)
outdir/prokka:contig_1_108 (length 709)
outdir/prokka:contig_1_109 (length 445)
outdir/prokka:contig_1_110 (length 193)
outdir/prokka:contig_1_111 (length 267)
outdir/prokka:contig_1_112 (length 606)
outdir/prokka:contig_1_113 (length 119)
outdir/prokka:contig_1_114 (length 66)
outdir/prokka:contig_1_115 (length 174)
outdir/prokka:contig_1_116 (length 210)
outdir/prokka:contig_1_117 (length 301)
outdir/prokka:contig_1_118 (length 217)
outdir/prokka:contig_1_119 (length 314)
outdir/prokka:contig_1_120 (length 325)
outdir/prokka:contig_1_121 (length 361)
outdir/prokka:contig_1_122 (length 351)
outdir/prokka:contig_1_123 (length 268)
outdir/prokka:contig_1_124 (length 280)
outdir/prokka:contig_1_125 (length 335)
outdir/prokka:contig_1_126 (length 214)
outdir/prokka:contig_1_127 (length 252)
outdir/prokka:contig_1_128 (length 274)
outdir/prokka:contig_1_129 (length 109)
outdir/prokka:contig_1_130 (length 103)
outdir/prokka:contig_1_131 (length 281)
outdir/prokka:contig_1_132 (length 418)
outdir/prokka:contig_1_133 (length 486)
outdir/prokka:contig_1_134 (length 289)
outdir/prokka:contig_1_135 (length 299)
outdir/prokka:contig_1_136 (length 274)
outdir/prokka:contig_1_137 (length 431)
outdir/prokka:contig_1_138 (length 159)
outdir/prokka:contig_1_139 (length 342)
outdir/prokka:contig_1_140 (length 368)
outdir/prokka:contig_1_141 (length 865)
outdir/prokka:contig_1_142 (length 136)
outdir/prokka:contig_1_143 (length 381)
outdir/prokka:contig_1_144 (length 232)
outdir/prokka:contig_1_145 (length 879)
outdir/prokka:contig_1_146 (length 343)
outdir/prokka:contig_1_147 (length 391)
outdir/prokka:contig_1_148 (length 213)
outdir/prokka:contig_1_149 (length 305)
outdir/prokka:contig_1_150 (length 225)
outdir/prokka:contig_1_151 (length 607)
outdir/prokka:contig_1_152 (length 901)
outdir/prokka:contig_1_153 (length 315)
outdir/prokka:contig_1_154 (length 89)
outdir/prokka:contig_1_155 (length 120)
outdir/prokka:contig_1_156 (length 373)
outdir/prokka:contig_1_157 (length 116)
outdir/prokka:contig_1_158 (length 503)
outdir/prokka:contig_1_159 (length 470)
outdir/prokka:contig_1_160 (length 358)
outdir/prokka:contig_1_161 (length 581)
outdir/prokka:contig_1_162 (length 155)
outdir/prokka:contig_1_163 (length 457)
outdir/prokka:contig_1_164 (length 162)
outdir/prokka:contig_1_165 (length 200)
outdir/prokka:contig_1_166 (length 209)
outdir/prokka:contig_1_167 (length 231)
outdir/prokka:contig_1_168 (length 238)
outdir/prokka:contig_1_169 (length 202)
outdir/prokka:contig_1_170 (length 107)
outdir/prokka:contig_1_171 (length 456)
outdir/prokka:contig_1_172 (length 433)
outdir/prokka:contig_1_173 (length 663)
outdir/prokka:contig_1_174 (length 88)
outdir/prokka:contig_1_175 (length 708)
outdir/prokka:contig_1_176 (length 89)
outdir/prokka:contig_1_177 (length 187)
outdir/prokka:contig_1_178 (length 194)
outdir/prokka:contig_1_179 (length 167)
outdir/prokka:contig_1_180 (length 118)
outdir/prokka:contig_1_181 (length 173)
outdir/prokka:contig_1_182 (length 280)
outdir/prokka:contig_1_183 (length 241)
outdir/prokka:contig_1_184 (length 98)
outdir/prokka:contig_1_185 (length 63)
outdir/prokka:contig_1_186 (length 530)
outdir/prokka:contig_1_187 (length 246)
outdir/prokka:contig_1_188 (length 449)
outdir/prokka:contig_1_189 (length 405)
outdir/prokka:contig_1_190 (length 196)
outdir/prokka:contig_1_191 (length 450)
outdir/prokka:contig_1_192 (length 141)
outdir/prokka:contig_1_193 (length 124)
outdir/prokka:contig_1_194 (length 160)
outdir/prokka:contig_1_195 (length 192)
outdir/prokka:contig_1_196 (length 333)
outdir/prokka:contig_1_197 (length 200)
outdir/prokka:contig_1_198 (length 148)
outdir/prokka:contig_1_199 (length 237)
outdir/prokka:contig_1_200 (length 662)
outdir/prokka:contig_1_201 (length 186)
outdir/prokka:contig_1_202 (length 702)
outdir/prokka:contig_1_203 (length 881)
outdir/prokka:contig_1_204 (length 124)
outdir/prokka:contig_1_205 (length 265)
outdir/prokka:contig_1_206 (length 257)
outdir/prokka:contig_1_207 (length 211)
outdir/prokka:contig_1_208 (length 277)
outdir/prokka:contig_1_209 (length 203)
outdir/prokka:contig_1_210 (length 179)
outdir/prokka:contig_1_211 (length 169)
outdir/prokka:contig_1_212 (length 253)
outdir/prokka:contig_1_213 (length 73)
outdir/prokka:contig_1_214 (length 506)
outdir/prokka:contig_1_215 (length 233)
outdir/prokka:contig_1_216 (length 136)
outdir/prokka:contig_1_217 (length 244)
outdir/prokka:contig_1_218 (length 432)
outdir/prokka:contig_1_219 (length 322)
outdir/prokka:contig_1_220 (length 675)
outdir/prokka:contig_1_221 (length 242)
outdir/prokka:contig_1_222 (length 299)
outdir/prokka:contig_1_223 (length 118)
outdir/prokka:contig_1_224 (length 193)
outdir/prokka:contig_1_225 (length 98)
outdir/prokka:contig_1_226 (length 317)
outdir/prokka:contig_1_227 (length 251)
outdir/prokka:contig_1_228 (length 318)
outdir/prokka:contig_1_229 (length 316)
outdir/prokka:contig_1_230 (length 150)
outdir/prokka:contig_1_231 (length 755)
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DiscRep_ALL:DISC_INCONSISTENT_MOLINFO_TECH::Molinfo Technique Report (some missing, all same)
DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::technique (all missing)
DiscRep_SUB:DISC_INCONSISTENT_MOLINFO_TECH::2 Molinfos are missing field technique
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