edgeR Analysis Output:

Differential Expression Counts:

Plots:

Tables:

Alt-click links to download file.

Click floppy disc icon associated history item to download all files.

.tsv files can be viewed in Excel or any spreadsheet program.

Additional Information

• TMM was the method used to normalise library sizes.
• The edgeR quasi-likelihood test was used with robust settings (robust=TRUE with estimateDisp and glmQLFit).
• MD-Plot highlighted genes are significant at FDR of 0.05 and exhibit log2-fold-change of at least 0.

Summary of experimental data:

*CHECK THAT SAMPLES ARE ASSOCIATED WITH CORRECT GROUP(S)*